An18g06600 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00014300 T33592_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00014031 RRM 8 79

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_00996 Arthroderma benhamiae ARB_00996 N 0.792
AFUA_6G06490 Aspergillus fumigatus CADAFUAG00001761 N 0.931
ANIA_05779 Aspergillus nidulans CADANIAG00003274 N 0.889
AO090003000020 Aspergillus oryzae CADAORAG00000707 N 0.917
ATEG_07424 Aspergillus terreus CADATEAG00001937 N 0.958
NFIA_052140 Neosartorya fischeri CADNFIAG00004882 N 0.903
e_gw1.4.2238.1 Thielavia terrestris e_gw1.4.2238.1 N 0.712
estExt_fgenesh1_kg.C_140043 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140043 N 0.736
estExt_Genewise1.C_21399 Myceliophthora thermophila estExt_Genewise1.C_21399 N 0.740
EAT88707.1 Phaeosphaeria nodorum EAT88707.1 N 0.750
AB07933.1 Alternaria brassicicola AB07933.1 N 0.722
fgenesh1_pg.00129_#_17 Aspergillus carbonarius fgenesh1_pg.00129_#_17 N 0.972
GSTUMT00009927001 Tuber melanosporum GSTUMT00009927001 N 0.736
Pc14g01320 Penicillium chrysogenum Pc14g01320 N 0.877
ACLA_088270 Aspergillus clavatus CADACLAG00008860 N 0.931
UREG_07837 Uncinocarpus reesii UREG_07837 N 0.792
BDBG_01733 Blastomyces dermatitidis BDBG_01733 N 0.875
CHGG_01555 Chaetomium globosum CHGG_01555 N 0.726
CIMG_07275 Coccidioides immitis CIMG_07275 N 0.861
CPSG_08791 Coccidioides posadasii CPSG_08791 N 0.847
HCAG_04114 Histoplasma capsulatum HCAG_04114 N 0.861
MCYG_07255 Microsporum canis MCYG_07255 N 0.792
MGYG_04754 Microsporum gypseum MGYG_04754 N 0.792
PABG_01366 Paracoccidioides brasiliensis PABG_01366 N 0.875
PTRG_08794 Pyrenophora tritici repentis PTRG_08794 N 0.708
SNOG_03502 Stagonospora nodorum SNOG_03502 N 0.750
TEQG_07968 Trichophyton equinum TEQG_07968 N 0.792
TERG_01651 Trichophyton rubrum TERG_01651 N 0.792
TESG_04202 Trichophyton tonsurans TESG_04202 N 0.792
PMAA_046550 Penicillium marneffei PMAA_046550 N 0.736