CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_07837
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_07837
T31374_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_07837
RRM
17
88
LYCSNLPDKVKKPDLRLALYTLFSTYGVVLDVVAMKTEKMRGQAHIVFRDIQTSTQAMRALQGFNFFGKEIR
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_08791
Coccidioides posadasii
CPSG_08791
N
0.903
CIMG_07275
Coccidioides immitis
CIMG_07275
N
0.889
PABG_01366
Paracoccidioides brasiliensis
PABG_01366
N
0.875
BDBG_01733
Blastomyces dermatitidis
BDBG_01733
N
0.875
HCAG_04114
Histoplasma capsulatum
HCAG_04114
N
0.861
ACLA_088270
Aspergillus clavatus
CADACLAG00008860
N
0.833
MCYG_07255
Microsporum canis
MCYG_07255
N
0.833
MGYG_04754
Microsporum gypseum
MGYG_04754
N
0.833
AFUA_6G06490
Aspergillus fumigatus
CADAFUAG00001761
N
0.833
TESG_04202
Trichophyton tonsurans
TESG_04202
N
0.833
TERG_01651
Trichophyton rubrum
TERG_01651
N
0.833
TEQG_07968
Trichophyton equinum
TEQG_07968
N
0.833
ARB_00996
Arthroderma benhamiae
ARB_00996
N
0.833
PMAA_046550
Penicillium marneffei
PMAA_046550
N
0.819
ANIA_05779
Aspergillus nidulans
CADANIAG00003274
N
0.819
ATEG_07424
Aspergillus terreus
CADATEAG00001937
N
0.819
NFIA_052140
Neosartorya fischeri
CADNFIAG00004882
N
0.806
An18g06600
Aspergillus niger
CADANGAG00014300
N
0.792
fgenesh1_pg.00129_#_17
Aspergillus carbonarius
fgenesh1_pg.00129_#_17
N
0.792
AO090003000020
Aspergillus oryzae
CADAORAG00000707
N
0.778
Pc14g01320
Penicillium chrysogenum
Pc14g01320
N
0.767
GSTUMT00009927001
Tuber melanosporum
GSTUMT00009927001
N
0.750
estExt_Genewise1.C_21399
Myceliophthora thermophila
estExt_Genewise1.C_21399
N
0.712
SNOG_03502
Stagonospora nodorum
SNOG_03502
N
0.708
EAT88707.1
Phaeosphaeria nodorum
EAT88707.1
N
0.708