fgenesh1_pg.00129_#_17 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.00129_#_17 T56518_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.00129_#_17 RRM 20 91

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
An18g06600 Aspergillus niger CADANGAG00014300 N 0.972
ATEG_07424 Aspergillus terreus CADATEAG00001937 N 0.958
AFUA_6G06490 Aspergillus fumigatus CADAFUAG00001761 N 0.931
ACLA_088270 Aspergillus clavatus CADACLAG00008860 N 0.931
AO090003000020 Aspergillus oryzae CADAORAG00000707 N 0.903
NFIA_052140 Neosartorya fischeri CADNFIAG00004882 N 0.903
ANIA_05779 Aspergillus nidulans CADANIAG00003274 N 0.889
Pc14g01320 Penicillium chrysogenum Pc14g01320 N 0.863
BDBG_01733 Blastomyces dermatitidis BDBG_01733 N 0.861
CIMG_07275 Coccidioides immitis CIMG_07275 N 0.861
PABG_01366 Paracoccidioides brasiliensis PABG_01366 N 0.861
CPSG_08791 Coccidioides posadasii CPSG_08791 N 0.847
HCAG_04114 Histoplasma capsulatum HCAG_04114 N 0.847
UREG_07837 Uncinocarpus reesii UREG_07837 N 0.792
TESG_04202 Trichophyton tonsurans TESG_04202 N 0.778
TEQG_07968 Trichophyton equinum TEQG_07968 N 0.778
TERG_01651 Trichophyton rubrum TERG_01651 N 0.778
ARB_00996 Arthroderma benhamiae ARB_00996 N 0.778
MGYG_04754 Microsporum gypseum MGYG_04754 N 0.778
MCYG_07255 Microsporum canis MCYG_07255 N 0.778
EAT88707.1 Phaeosphaeria nodorum EAT88707.1 N 0.736
SNOG_03502 Stagonospora nodorum SNOG_03502 N 0.736
estExt_Genewise1.C_21399 Myceliophthora thermophila estExt_Genewise1.C_21399 N 0.726
estExt_fgenesh1_kg.C_140043 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140043 N 0.722
GSTUMT00009927001 Tuber melanosporum GSTUMT00009927001 N 0.722
PMAA_046550 Penicillium marneffei PMAA_046550 N 0.722
CHGG_01555 Chaetomium globosum CHGG_01555 N 0.712
AB07933.1 Alternaria brassicicola AB07933.1 N 0.708