CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CPSG_08791
(
Coccidioides posadasii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CPSG_08791
T29085_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPSG_08791T0
RRM
17
88
LYCTNLPDKLRKLDLRLALYTLFSTYGTVLDVVAMKTEKMRGQAHVVFRDIQTSTQAMRALQGFNFFGKEMR
Links
Other
RRM
family RBPs
Other
Coccidioides posadasii
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_07275
Coccidioides immitis
CIMG_07275
N
0.986
BDBG_01733
Blastomyces dermatitidis
BDBG_01733
N
0.917
PABG_01366
Paracoccidioides brasiliensis
PABG_01366
N
0.917
ANIA_05779
Aspergillus nidulans
CADANIAG00003274
N
0.903
HCAG_04114
Histoplasma capsulatum
HCAG_04114
N
0.903
UREG_07837
Uncinocarpus reesii
UREG_07837
N
0.903
ACLA_088270
Aspergillus clavatus
CADACLAG00008860
N
0.889
AFUA_6G06490
Aspergillus fumigatus
CADAFUAG00001761
N
0.889
ATEG_07424
Aspergillus terreus
CADATEAG00001937
N
0.875
NFIA_052140
Neosartorya fischeri
CADNFIAG00004882
N
0.861
MCYG_07255
Microsporum canis
MCYG_07255
N
0.847
An18g06600
Aspergillus niger
CADANGAG00014300
N
0.847
fgenesh1_pg.00129_#_17
Aspergillus carbonarius
fgenesh1_pg.00129_#_17
N
0.847
ARB_00996
Arthroderma benhamiae
ARB_00996
N
0.819
TERG_01651
Trichophyton rubrum
TERG_01651
N
0.819
TESG_04202
Trichophyton tonsurans
TESG_04202
N
0.819
TEQG_07968
Trichophyton equinum
TEQG_07968
N
0.819
MGYG_04754
Microsporum gypseum
MGYG_04754
N
0.819
Pc14g01320
Penicillium chrysogenum
Pc14g01320
N
0.795
AO090003000020
Aspergillus oryzae
CADAORAG00000707
N
0.792
PMAA_046550
Penicillium marneffei
PMAA_046550
N
0.778
EAT88707.1
Phaeosphaeria nodorum
EAT88707.1
N
0.736
GSTUMT00009927001
Tuber melanosporum
GSTUMT00009927001
N
0.736
SNOG_03502
Stagonospora nodorum
SNOG_03502
N
0.736
estExt_Genewise1.C_21399
Myceliophthora thermophila
estExt_Genewise1.C_21399
N
0.726
AB07933.1
Alternaria brassicicola
AB07933.1
N
0.722
CHGG_01555
Chaetomium globosum
CHGG_01555
N
0.712
PTRG_08794
Pyrenophora tritici repentis
PTRG_08794
N
0.708
estExt_fgenesh1_kg.C_140043
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140043
N
0.708