CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_04202
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_04202
T31170_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_04202T0
RRM
17
88
LYCTNLPDKIKKPDLRTALYTLFSTYGAVLDVVAMRSKGMRGQAHIVFRDVQTSTQAMRALQGFDFFGKEMK
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_00996
Arthroderma benhamiae
ARB_00996
N
1.000
TEQG_07968
Trichophyton equinum
TEQG_07968
N
1.000
MGYG_04754
Microsporum gypseum
MGYG_04754
N
1.000
TERG_01651
Trichophyton rubrum
TERG_01651
N
1.000
MCYG_07255
Microsporum canis
MCYG_07255
N
0.958
PABG_01366
Paracoccidioides brasiliensis
PABG_01366
N
0.847
BDBG_01733
Blastomyces dermatitidis
BDBG_01733
N
0.847
UREG_07837
Uncinocarpus reesii
UREG_07837
N
0.833
CIMG_07275
Coccidioides immitis
CIMG_07275
N
0.833
HCAG_04114
Histoplasma capsulatum
HCAG_04114
N
0.833
ACLA_088270
Aspergillus clavatus
CADACLAG00008860
N
0.833
CPSG_08791
Coccidioides posadasii
CPSG_08791
N
0.819
Pc14g01320
Penicillium chrysogenum
Pc14g01320
N
0.808
ATEG_07424
Aspergillus terreus
CADATEAG00001937
N
0.806
AFUA_6G06490
Aspergillus fumigatus
CADAFUAG00001761
N
0.806
PMAA_046550
Penicillium marneffei
PMAA_046550
N
0.792
An18g06600
Aspergillus niger
CADANGAG00014300
N
0.792
ANIA_05779
Aspergillus nidulans
CADANIAG00003274
N
0.778
AO090003000020
Aspergillus oryzae
CADAORAG00000707
N
0.778
NFIA_052140
Neosartorya fischeri
CADNFIAG00004882
N
0.778
fgenesh1_pg.00129_#_17
Aspergillus carbonarius
fgenesh1_pg.00129_#_17
N
0.778
estExt_Genewise1.C_21399
Myceliophthora thermophila
estExt_Genewise1.C_21399
N
0.726
CHGG_01555
Chaetomium globosum
CHGG_01555
N
0.726
GSTUMT00009927001
Tuber melanosporum
GSTUMT00009927001
N
0.708