Sltm (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000007463 T36471_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000007002 RRM 332 402

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

115 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SLTM Macaca mulatta ENSMMUG00000022200 N 0.986
SLTM Oryzias latipes ENSORLG00000008161 N 0.887
SAFB Oryzias latipes ENSORLG00000016989 N 0.746
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.775
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.986
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.775
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 0.732
SLTM Pan troglodytes ENSPTRG00000007121 N 0.986
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.775
SAFB Pan troglodytes ENSPTRG00000010335 N 0.718
SAFB Pteropus vampyrus ENSPVAG00000004913 N 0.732
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.986
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.986
SAFB Ochotona princeps ENSOPRG00000011561 N 0.718
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.972
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.775
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.746
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.972
Sltm Mus musculus ENSMUSG00000032212 N 0.972
Safb2 Mus musculus ENSMUSG00000042625 N 0.761
Safb Mus musculus ENSMUSG00000071054 N 0.718
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.972
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.775
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.746
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.986
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 0.732
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.775
SAFB2 Sorex araneus ENSSARG00000000649 N 0.775
SAFB Sorex araneus ENSSARG00000010475 N 0.732
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.972
SAFB Tursiops truncatus ENSTTRG00000013588 N 0.732
SLTM Vicugna pacos ENSVPAG00000008606 N 0.986
SAFB Vicugna pacos ENSVPAG00000012043 N 0.732
sltm Xenopus tropicalis ENSXETG00000010840 N 0.930
168846 Helobdella robusta 168846 N 0.718
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.775
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.775
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.718
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.986
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.761
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 0.732
AAI00172 Xenopus laevis AAI00172 N 0.930
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.775
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.986
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.972
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.775
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.775
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.986
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.775
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.718
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.958
SLTM Tetraodon nigroviridis ENSTNIG00000009334 N 0.817
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.746
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.746
SLTM Takifugu rubripes ENSTRUG00000017767 N 0.831
SAFB Tarsius syrichta ENSTSYG00000001851 N 0.732
Q498L2 Xenopus laevis Q498L2 N 0.930
SAFB Macaca mulatta ENSMMUG00000017970 N 0.732
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.718
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.972
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.746
SLTM Cavia porcellus ENSCPOG00000026109 N 0.972
SAFB Cavia porcellus ENSCPOG00000026322 N 0.732
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.901
safb Danio rerio ENSDARG00000020467 N 0.761
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.986
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 0.732
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.775
Safb Dipodomys ordii ENSDORG00000016200 N 0.732
LOC100068259 Equus caballus ENSECAG00000011267 N 0.986
LOC100064953 Equus caballus ENSECAG00000018659 N 0.732
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.775
SAFB Callithrix jacchus ENSCJAG00000017081 N 0.732
SLTM Anolis carolinensis ENSACAG00000015120 N 0.944
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.803
ENSACAG00000016928 Anolis carolinensis ENSACAG00000016928 N 0.718
SAFB2 Bos taurus ENSBTAG00000001790 N 0.775
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 0.732
SLTM Bos taurus ENSBTAG00000011319 N 0.986
LOC787645 Bos taurus ENSBTAG00000035584 N 0.746
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 0.732
SLTM Canis familiaris ENSCAFG00000016586 N 0.986
SAFB Canis familiaris ENSCAFG00000018803 N 0.732
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.775
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.958
LOC100064922 Equus caballus ENSECAG00000018978 N 0.775
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.915
SLTM Echinops telfairi ENSETEG00000008003 N 0.972
SAFB Gorilla gorilla ENSGGOG00000015109 N 0.732
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.775
SAFB Loxodonta africana ENSLAFG00000003840 N 0.732
SLTM Loxodonta africana ENSLAFG00000017922 N 0.972
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.761
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.775
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.718
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.958
SAFB Microcebus murinus ENSMICG00000008739 N 0.732
SLTM Microcebus murinus ENSMICG00000013069 N 0.972
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.775
SAFB Myotis lucifugus ENSMLUG00000001081 N 0.732
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.775
SAFB2 Gallus gallus ENSGALG00000013365 N 0.718
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.775
SAFB Echinops telfairi ENSETEG00000018679 N 0.732
SLTM Felis catus ENSFCAG00000004826 N 0.972
SAFB2 Felis catus ENSFCAG00000011834 N 0.775
SAFB Felis catus ENSFCAG00000011835 N 0.732
SAFB2 Homo sapiens ENSG00000130254 N 0.775
SLTM Homo sapiens ENSG00000137776 N 0.986
SAFB Homo sapiens ENSG00000160633 N 0.732
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.746
SLTM Gasterosteus aculeatus ENSGACG00000015814 N 0.845
SAFB2 Gallus gallus ENSGALG00000001948 N 0.775
SLTM Gallus gallus ENSGALG00000004192 N 0.958
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.775