CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF3
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000010622
T36818_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000009696
RRM
9
78
LFVGQIPRHLEEKDFTLSFVQFRRMFELTFIKHQSTCWCKGCAFLTYCARDSALKAQSALHEQKTLPGMN
ENSEEUP00000009696
RRM
97
163
LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPX
ENSEEUP00000009696
RRM
380
422
IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFX
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CTRG_01565
Candida tropicalis
CTRG_01565
N
0.000
LELG_01021
Lodderomyces elongisporus
LELG_01021
N
0.000
orf19.809
Candida albicans
orf19.809
N
0.000
Cd36_18760
Candida dubliniensis
Cd36_18760
N
0.000