CELF3 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000001623 T40287_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.805
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.790
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000001537 RRM 1 65
ENSPCAP00000001537 RRM 83 151
ENSPCAP00000001537 RRM 372 442

Links

Other RRM family RBPs
Other Procavia capensis RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF3 Sus scrofa ENSSSCG00000006618 I 0.986
CELF3 Homo sapiens ENSG00000159409 I 0.986
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.986
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.971
CELF3 Canis familiaris ENSCAFG00000012794 I 0.971
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.971
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.971
CELF3 Equus caballus ENSECAG00000020365 I 0.971
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.971
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.971
Celf3 Mus musculus ENSMUSG00000028137 I 0.971
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.971
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.971
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.971
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.971
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.971
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.902
AAH72134 Xenopus laevis AAH72134 I 0.900
Q91579 Xenopus laevis Q91579 I 0.900
AAH57704 Xenopus laevis AAH57704 I 0.900
AAA81375 Xenopus laevis AAA81375 I 0.900
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.890
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.890
AAH46942 Xenopus laevis AAH46942 I 0.890
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.886
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.886
celf3 Danio rerio ENSDARG00000034668 I 0.871
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.867
CELF3 Oryzias latipes ENSORLG00000010447 I 0.853
CELF3 Danio rerio ENSDARG00000006983 I 0.852
CELF3 Pteropus vampyrus ENSPVAG00000015012 N 0.837
CELF3 Tursiops truncatus ENSTTRG00000009835 N 0.832
CELF3 Dasypus novemcinctus ENSDNOG00000011384 N 0.822
CELF3 Microcebus murinus ENSMICG00000010644 N 0.820
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.810
celf5 Danio rerio ENSDARG00000071375 I 0.805
BRUNOL5 Homo sapiens ENSG00000161082 D 0.805
Celf6 Mus musculus ENSMUSG00000032297 I 0.795
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.795
CELF5 Oryzias latipes ENSORLG00000004600 I 0.795
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.795
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.790
HEXA Macaca mulatta ENSMMUG00000010687 I 0.790
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.790
CELF6 Sus scrofa ENSSSCG00000001928 I 0.790
CELF6 Bos taurus ENSBTAG00000014092 I 0.790
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.790
CELF6 Felis catus ENSFCAG00000016249 I 0.790
BRUNOL6 Homo sapiens ENSG00000140488 D 0.790
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.790
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.786
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.786
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.786
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.786
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.786
Celf4 Mus musculus ENSMUSG00000024268 I 0.781
ACH69785 Xenopus laevis ACH69785 I 0.781
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.781
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.776
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.774
CELF4 Oryzias latipes ENSORLG00000008913 I 0.771
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.771
CELF3 Oryzias latipes ENSORLG00000002630 I 0.768
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.757
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.752
Bm1_27610 Brugia malayi Bm1_27610 I 0.752
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.751
CELF3 Erinaceus europaeus ENSEEUG00000010622 N 0.744
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.724
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.711
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.705
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.703
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.703