CELF3 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000020365 T36683_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.829
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.819
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.716
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000018084 RRM 9 78
ENSECAP00000018084 RRM 97 165
ENSECAP00000018084 RRM 382 452

Links

Other RRM family RBPs
Other Equus caballus RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 1.000
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 1.000
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 1.000
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 1.000
Celf3 Mus musculus ENSMUSG00000028137 I 1.000
CELF3 Loxodonta africana ENSLAFG00000030147 I 1.000
CELF3 Monodelphis domestica ENSMODG00000018897 I 1.000
CELF3 Canis familiaris ENSCAFG00000012794 I 1.000
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 1.000
CELF3 Pan troglodytes ENSPTRG00000001293 I 1.000
CELF3 Homo sapiens ENSG00000159409 I 1.000
CELF3 Cavia porcellus ENSCPOG00000003539 I 1.000
CELF3 Callithrix jacchus ENSCJAG00000007857 I 1.000
CELF3 Sus scrofa ENSSSCG00000006618 I 0.981
CELF3 Procavia capensis ENSPCAG00000001623 I 0.971
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.967
AAA81375 Xenopus laevis AAA81375 I 0.924
AAH57704 Xenopus laevis AAH57704 I 0.924
AAH72134 Xenopus laevis AAH72134 I 0.924
Q91579 Xenopus laevis Q91579 I 0.924
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.919
AAH46942 Xenopus laevis AAH46942 I 0.914
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.914
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.914
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.910
celf3 Danio rerio ENSDARG00000034668 I 0.895
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.895
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.886
CELF3 Oryzias latipes ENSORLG00000010447 I 0.881
CELF3 Danio rerio ENSDARG00000006983 I 0.871
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.838
CELF3 Tursiops truncatus ENSTTRG00000009835 N 0.829
CELF3 Pteropus vampyrus ENSPVAG00000015012 N 0.829
BRUNOL5 Homo sapiens ENSG00000161082 D 0.829
Celf6 Mus musculus ENSMUSG00000032297 I 0.824
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.824
celf5 Danio rerio ENSDARG00000071375 I 0.824
CELF3 Dasypus novemcinctus ENSDNOG00000011384 N 0.820
CELF6 Felis catus ENSFCAG00000016249 I 0.819
BRUNOL6 Homo sapiens ENSG00000140488 D 0.819
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.819
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.819
CELF6 Sus scrofa ENSSSCG00000001928 I 0.819
HEXA Macaca mulatta ENSMMUG00000010687 I 0.819
CELF6 Bos taurus ENSBTAG00000014092 I 0.819
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.819
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.819
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.814
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.814
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.814
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.814
CELF5 Oryzias latipes ENSORLG00000004600 I 0.814
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.810
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.810
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.805
CELF3 Microcebus murinus ENSMICG00000010644 N 0.805
ACH69785 Xenopus laevis ACH69785 I 0.805
Celf4 Mus musculus ENSMUSG00000024268 I 0.805
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.805
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.802
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.795
CELF4 Oryzias latipes ENSORLG00000008913 I 0.795
CELF3 Oryzias latipes ENSORLG00000002630 I 0.787
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.781
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.781
Bm1_27610 Brugia malayi Bm1_27610 I 0.776
CELF3 Erinaceus europaeus ENSEEUG00000010622 N 0.773
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.752
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.739
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.738
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.733
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.726
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.726
CRE09771 Caenorhabditis remanei CRE09771 I 0.720
CBG15358 Caenorhabditis briggsae CBG15358 I 0.720
ACH69784 Xenopus laevis ACH69784 I 0.720
unc-75 Caenorhabditis elegans C17D12.2 D 0.716
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.716
ENSPPYG00000000859 Pongo pygmaeus ENSPPYG00000000859 N 0.712
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.711
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.711
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.711
BRUNOL4 Homo sapiens ENSG00000101489 D 0.711
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.706