CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCBP2L
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000016081
T38586_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000014656
RRM
41
111
LYVGNFSFYTSEEQINELFSRCGYVRNIFMSLDKIKKIACGFCFMEYYSRVDAENAMWFLNGTCLDDRVIC
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R004608
Ailuropoda melanoleuca
Ame_R004608
N
0.704
Cbp20
Drosophila melanogaster
FBgn0022943
N
0.718
ncbp2
Xenopus tropicalis
ENSXETG00000019384
N
0.718
B5G279_TAEGU
Taeniopygia guttata
ENSTGUG00000007323
N
0.718
NCBP2
Tupaia belangeri
ENSTBEG00000015222
N
0.704
ENSSTOG00000001584
Spermophilus tridecemlineatus
ENSSTOG00000001584
N
0.704
NCBP2L
Sus scrofa
ENSSSCG00000012562
N
0.732
ENSSSCG00000011840
Sus scrofa
ENSSSCG00000011840
N
0.704
ENSSSCG00000011835
Sus scrofa
ENSSSCG00000011835
N
0.704
Pigz
Rattus norvegicus
ENSRNOG00000001746
N
0.704
NCBP2
Pteropus vampyrus
ENSPVAG00000017273
N
0.704
GA11577-RA
Drosophila pseudoobscura
FBgn0071628
N
0.718
GF16759
Drosophila ananassae
FBgn0093780
N
0.718
GE25514
Drosophila yakuba
FBgn0242580
N
0.718
GK11244
Drosophila willistoni
FBgn0213255
N
0.718
GJ23276
Drosophila virilis
FBgn0210378
N
0.718
GJ18756
Drosophila virilis
FBgn0205908
N
0.718
GD19204
Drosophila simulans
FBgn0190709
N
0.718
GM15280
Drosophila sechellia
FBgn0170200
N
0.718
GL12592
Drosophila persimilis
FBgn0150198
N
0.718
GI23717
Drosophila mojavensis
FBgn0146442
N
0.718
GH15101
Drosophila grimshawi
FBgn0122576
N
0.718
GG22670
Drosophila erecta
FBgn0114835
N
0.718
NCBP2
Pan troglodytes
ENSPTRG00000015789
N
0.704
ENSPPYG00000014449
Pongo pygmaeus
ENSPPYG00000014449
N
0.704
NCBP2
Homo sapiens
ENSG00000114503
N
0.704
NCBP2
Equus caballus
ENSECAG00000016153
N
0.704
NCBP2L
Equus caballus
ENSECAG00000003478
N
0.704
ncbp2
Danio rerio
ENSDARG00000014898
N
0.704
NCBP2
Cavia porcellus
ENSCPOG00000002976
N
0.718
LOC100404338
Callithrix jacchus
ENSCJAG00000013735
N
0.704
NCBP2L
Canis familiaris
ENSCAFG00000017990
N
0.789
NCBP2
Canis familiaris
ENSCAFG00000013100
N
0.704
NCBP2_BOVIN
Bos taurus
ENSBTAG00000008873
N
0.704
NCBP2_ANOGA
Anopheles gambiae
AGAP002547
N
0.718
NCBP2_CHICK
Gallus gallus
ENSGALG00000005753
N
0.704
NCBP2
Loxodonta africana
ENSLAFG00000006372
N
0.704
NCBP2
Procavia capensis
ENSPCAG00000003219
N
0.718
ENSOPRG00000007634
Ochotona princeps
ENSOPRG00000007634
N
0.704
NCBP2
Otolemur garnettii
ENSOGAG00000005009
N
0.704
NCBP2
Oryctolagus cuniculus
ENSOCUG00000006738
N
0.704
Ncbp2
Mus musculus
ENSMUSG00000022774
N
0.704
NCBP2
Macaca mulatta
ENSMMUG00000007825
N
0.704
NCBP2
Myotis lucifugus
ENSMLUG00000017500
N
0.704
NCBP2
Microcebus murinus
ENSMICG00000003162
N
0.704
ENSMGAG00000002257
Meleagris gallopavo
ENSMGAG00000002257
N
0.704
NCBP2L
Loxodonta africana
ENSLAFG00000027581
N
0.732
amel4_ncbi_hmm3188
Apis mellifera
amel4_ncbi_hmm3188
N
0.704