NCBP2_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000005753 T37647_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000009225 RRM 45 115

Links

Other RRM family RBPs
Other Gallus gallus RBPs

147 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 1.000
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.986
P52299 Xenopus laevis P52299 N 0.930
AAH72902 Xenopus laevis AAH72902 N 0.930
CAA59259 Xenopus laevis CAA59259 N 0.915
2118330B Xenopus laevis 2118330B N 0.915
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.915
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.901
ncbp2 Danio rerio ENSDARG00000014898 N 0.873
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.873
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.859
GH15101 Drosophila grimshawi FBgn0122576 N 0.859
GI23717 Drosophila mojavensis FBgn0146442 N 0.859
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.859
GF16759 Drosophila ananassae FBgn0093780 N 0.859
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.859
GJ23276 Drosophila virilis FBgn0210378 N 0.859
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.845
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.845
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.845
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.845
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.845
NCBP2 Equus caballus ENSECAG00000016153 N 0.845
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.845
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.845
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.845
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.845
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.845
NCBP2 Homo sapiens ENSG00000114503 N 0.845
GK11244 Drosophila willistoni FBgn0213255 N 0.845
GG22670 Drosophila erecta FBgn0114835 N 0.845
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.845
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.845
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.845
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.845
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.845
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.845
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.845
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.845
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.845
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.845
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.845
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.845
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.845
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.845
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.845
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.845
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.845
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.845
PHUM535920 Pediculus humanus PHUM535920 N 0.831
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.831
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.831
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.831
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.831
GM15280 Drosophila sechellia FBgn0170200 N 0.831
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.831
GL12592 Drosophila persimilis FBgn0150198 N 0.831
Cbp20 Drosophila melanogaster FBgn0022943 N 0.831
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.831
GD19204 Drosophila simulans FBgn0190709 N 0.831
GE25514 Drosophila yakuba FBgn0242580 N 0.831
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.831
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.831
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.831
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.817
NCBP2 Gallus gallus ENSGALG00000006843 N 0.817
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.817
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.817
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.817
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.817
91084 Helobdella robusta 91084 N 0.817
GJ18756 Drosophila virilis FBgn0205908 N 0.817
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.817
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.817
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.817
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.817
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.803
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.803
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.803
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.803
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.803
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.803
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.789
LOAG_03270 Loa loa LOAG_03270 N 0.789
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.789
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.789
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.789
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.789
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.789
Bm1_02935 Brugia malayi Bm1_02935 N 0.775
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.775
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.775
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.761
NCBP2 Sorex araneus ENSSARG00000014294 N 0.746
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.746
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.746
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.746
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.746
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.746
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.732
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.732
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.732
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.732
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.732
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.732
TERG_03424 Trichophyton rubrum TERG_03424 N 0.732
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.732
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.732
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.732
NCBP2L Equus caballus ENSECAG00000003478 N 0.732
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.732
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.732
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.732
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.732
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.732
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.732
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.732
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.732
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.732
MCYG_04468 Microsporum canis MCYG_04468 N 0.732
NCU00210 Neurospora crassa NCU00210 N 0.732
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.732
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.732
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.732
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.732
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.718
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.718
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.718
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.718
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.718
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.718
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.718
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.718
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.718
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.718
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.718
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.718
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.718
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.718
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.718
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.718
An12g03930 Aspergillus niger CADANGAG00009835 N 0.718
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.704
NCBP2L Microcebus murinus ENSMICG00000016081 N 0.704
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.704
gw1.14.317.1 Chlorella NC64A gw1.14.317.1 N 0.704
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.704