GA11577-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0071628 T43125_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0284890 RRM 32 102

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

101 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GL12592 Drosophila persimilis FBgn0150198 N 1.000
GK11244 Drosophila willistoni FBgn0213255 N 0.986
GE25514 Drosophila yakuba FBgn0242580 N 0.972
GD19204 Drosophila simulans FBgn0190709 N 0.958
GM15280 Drosophila sechellia FBgn0170200 N 0.958
Cbp20 Drosophila melanogaster FBgn0022943 N 0.958
GG22670 Drosophila erecta FBgn0114835 N 0.944
GI23717 Drosophila mojavensis FBgn0146442 N 0.944
GH15101 Drosophila grimshawi FBgn0122576 N 0.944
GF16759 Drosophila ananassae FBgn0093780 N 0.944
GJ18756 Drosophila virilis FBgn0205908 N 0.944
GJ23276 Drosophila virilis FBgn0210378 N 0.944
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.859
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.859
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.845
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.845
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.831
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.831
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.831
AAH72902 Xenopus laevis AAH72902 N 0.817
P52299 Xenopus laevis P52299 N 0.817
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.817
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.817
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.817
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.817
ncbp2 Danio rerio ENSDARG00000014898 N 0.803
CAA59259 Xenopus laevis CAA59259 N 0.803
91084 Helobdella robusta 91084 N 0.803
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.803
2118330B Xenopus laevis 2118330B N 0.803
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.789
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.789
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.789
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.789
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.789
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.789
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.789
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.775
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.775
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.775
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.775
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.775
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.775
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.775
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.775
NCBP2 Homo sapiens ENSG00000114503 N 0.775
NCBP2 Equus caballus ENSECAG00000016153 N 0.775
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.775
NCBP2 Gallus gallus ENSGALG00000006843 N 0.775
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.775
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.775
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.775
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.775
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.775
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.775
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.775
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.775
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.775
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.775
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.775
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.775
PHUM535920 Pediculus humanus PHUM535920 N 0.775
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.775
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.775
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.775
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.775
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.761
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.761
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.761
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.761
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.761
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.761
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.761
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.761
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.746
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.746
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.746
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.746
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.746
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.746
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.746
LOAG_03270 Loa loa LOAG_03270 N 0.746
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.746
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.746
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.732
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.732
Bm1_02935 Brugia malayi Bm1_02935 N 0.732
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.732
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.718
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.718
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.718
NCBP2L Microcebus murinus ENSMICG00000016081 N 0.718
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.718
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.718
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.718
NCBP2L Equus caballus ENSECAG00000003478 N 0.704
NCBP2 Sorex araneus ENSSARG00000014294 N 0.704
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.704
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.704