RBM39 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000008764 T40359_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000008207 RRM 138 206
ENSPCAP00000008207 RRM 235 305
ENSPCAP00000008207 RRM 428 485

Links

Other RRM family RBPs
Other Procavia capensis RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM42 Homo sapiens ENSG00000126254 D 0.000
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.000
RBM42 Tarsius syrichta ENSTSYG00000014688 I 0.000
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.000
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.000
RBM42 Spermophilus tridecemlineatus ENSSTOG00000013050 I 0.000
RBM42 Sus scrofa ENSSSCG00000002905 I 0.000
RBM42 Sorex araneus ENSSARG00000010724 I 0.000
Rbm42 Rattus norvegicus ENSRNOG00000024278 I 0.000
RBM42 Pteropus vampyrus ENSPVAG00000012815 I 0.000
RBM42 Pan troglodytes ENSPTRG00000010852 I 0.000
ENSPPYG00000009871 Pongo pygmaeus ENSPPYG00000009871 I 0.000
AAI29698 Xenopus laevis AAI29698 I 0.000
PHUM106890 Pediculus humanus PHUM106890 I 0.000
A2VDB3 Xenopus laevis A2VDB3 I 0.000
XP_002167334.1 Hydra magnipapillata XP_002167334.1 I 0.000
Ame_R009099 Ailuropoda melanoleuca Ame_R009099 I 0.000
BGIBMGA005213 Bombyx mori BGIBMGA005213 I 0.000
estExt_Genewise1Plus.C_1180017 Capitella teleta estExt_Genewise1Plus.C_1180017 I 0.000
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.000
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.000
e_gw1.30.201.1 Daphnia pulex e_gw1.30.201.1 I 0.000
e_gw1.16.225.1 Lottia gigantea e_gw1.16.225.1 I 0.000
Aqu1.218430 Amphimedon queenslandica Aqu1.218430 I 0.000
Ppa-tag-262 Pristionchus pacificus PPA14507 I 0.000
RBM42 Procavia capensis ENSPCAG00000013053 I 0.000
RBM42 Oryzias latipes ENSORLG00000003387 I 0.000
rbm42 Danio rerio ENSDARG00000039910 I 0.000
RBM42 Cavia porcellus ENSCPOG00000012365 I 0.000
RBM42 Callithrix jacchus ENSCJAG00000010220 I 0.000
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.000
RBM42 Canis familiaris ENSCAFG00000006925 I 0.000
RBM42_BOVIN Bos taurus ENSBTAG00000013440 I 0.000
RBM42 Anolis carolinensis ENSACAG00000005495 I 0.000
AGAP010200 Anopheles gambiae AGAP010200 I 0.000
amel4_ncbi_hmm2520 Apis mellifera amel4_ncbi_hmm2520 I 0.000
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.000
LOC100051102 Equus caballus ENSECAG00000018215 I 0.000
RBM42 Erinaceus europaeus ENSEEUG00000004841 I 0.000
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.000
RBM42 Ochotona princeps ENSOPRG00000001229 I 0.000
RBM42 Otolemur garnettii ENSOGAG00000004144 I 0.000
RBM42 Oryctolagus cuniculus ENSOCUG00000003337 I 0.000
Rbm42 Mus musculus ENSMUSG00000036733 I 0.000
RBM42 Monodelphis domestica ENSMODG00000013957 I 0.000
RBM42 Macaca mulatta ENSMMUG00000018954 I 0.000
RBM42 Myotis lucifugus ENSMLUG00000011334 I 0.000
RBM42 Microcebus murinus ENSMICG00000009880 I 0.000
ENSMEUG00000016300 Macropus eugenii ENSMEUG00000016300 I 0.000
RBM42 Gorilla gorilla ENSGGOG00000009972 I 0.000
PTSG_04228 Salpingoeca rosetta PTSG_04228 I 0.000
SNAPOd2T00026674001 Oikopleura dioica SNAPOd2T00026674001 N 0.000