RBM23 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000002797 T37402_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000003666 RRM 171 239
ENSGACP00000003666 RRM 268 341
ENSGACP00000003666 RRM 450 512
ENSGACP00000003671 RRM 2 66
ENSGACP00000003671 RRM 95 165
ENSGACP00000003671 RRM 274 336

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.942
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.937
RBM23 Oryzias latipes ENSORLG00000010370 N 0.932
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.879
RBM23 Oryzias latipes ENSORLG00000009919 N 0.879
rbm39b Danio rerio ENSDARG00000041853 N 0.879
RBM39 Sus scrofa ENSSSCG00000007309 N 0.869
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.869
RBM39 Sorex araneus ENSSARG00000007673 N 0.869
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.869
RBM39 Homo sapiens ENSG00000131051 N 0.869
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.869
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.869
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.869
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.869
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.869
RBM39 Equus caballus ENSECAG00000013423 N 0.869
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.869
RBM39 Microcebus murinus ENSMICG00000001668 N 0.869
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.869
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.869
Rbm39 Mus musculus ENSMUSG00000027620 N 0.869
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.869
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.869
RBM39 Canis familiaris ENSCAFG00000008327 N 0.869
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.864
RBM39 Gallus gallus ENSGALG00000001550 N 0.864
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.859
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.859
rbm39a Danio rerio ENSDARG00000011613 N 0.854
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.850
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.845
AAH77813 Xenopus laevis AAH77813 N 0.845
AAH75146 Xenopus laevis AAH75146 N 0.840
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.834
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.807
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.799
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.796
RBM39 Echinops telfairi ENSETEG00000016295 N 0.772
RBM39 Procavia capensis ENSPCAG00000008764 N 0.772
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.752
AAEL005046 Aedes aegypti AAEL005046 N 0.739
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.738
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.734
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.734
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.734
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.734
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.734
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.725
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.725
PHUM394230 Pediculus humanus PHUM394230 N 0.720
GK15272 Drosophila willistoni FBgn0217277 N 0.710
AGAP008433 Anopheles gambiae AGAP008433 N 0.710
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.705
GH13506 Drosophila grimshawi FBgn0120982 N 0.705
GF14957 Drosophila ananassae FBgn0091982 N 0.700
CG11266 Drosophila melanogaster FBgn0031883 N 0.700
GG10454 Drosophila erecta FBgn0102763 N 0.700
GM16278 Drosophila sechellia FBgn0171194 N 0.700
GD23448 Drosophila simulans FBgn0194830 N 0.700
GE14328 Drosophila yakuba FBgn0231943 N 0.700