RBM23 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000005223 T42030_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007899 RRM 160 218
ENSTNIP00000007899 RRM 242 312
ENSTNIP00000007899 RRM 425 480

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM23 Oryzias latipes ENSORLG00000009919 N 0.872
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.847
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.847
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.842
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.834
RBM23 Oryzias latipes ENSORLG00000010370 N 0.832
rbm39a Danio rerio ENSDARG00000011613 N 0.832
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.820
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.812
rbm39b Danio rerio ENSDARG00000041853 N 0.811
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.807
RBM39 Gallus gallus ENSGALG00000001550 N 0.807
RBM39 Microcebus murinus ENSMICG00000001668 N 0.803
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.803
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.803
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.803
Rbm39 Mus musculus ENSMUSG00000027620 N 0.803
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.803
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.803
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.803
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.803
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.803
RBM39 Equus caballus ENSECAG00000013423 N 0.803
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.803
RBM39 Canis familiaris ENSCAFG00000008327 N 0.803
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.803
RBM39 Sus scrofa ENSSSCG00000007309 N 0.803
RBM39 Homo sapiens ENSG00000131051 N 0.803
RBM39 Sorex araneus ENSSARG00000007673 N 0.803
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.802
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.798
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.795
AAH77813 Xenopus laevis AAH77813 N 0.793
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.783
AAH75146 Xenopus laevis AAH75146 N 0.783
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.737
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.734
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.732
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.711
RBM39 Procavia capensis ENSPCAG00000008764 N 0.707
RBM39 Echinops telfairi ENSETEG00000016295 N 0.707