B9GT62_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0002s06340 T45453_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s06340.1 RRM 35 105
POPTR_0002s06340.1 RRM 123 192
POPTR_0002s06340.1 RRM 214 283
POPTR_0002s06340.1 RRM 317 386

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00013699001 Vitis vinifera GSVIVG00013699001 N 0.758
MDP0000286821 Malus x domestica MDP0000286821 N 0.712
MDP0000212007 Malus x domestica MDP0000212007 N 0.719
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.754
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.726
Glyma02g08480.1 Glycine max Glyma02g08480.1 N 0.712
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.730
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.804
28644.m000904 Ricinus communis 28644.m000904 N 0.779
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.890
ppa002584m Prunus persica ppa002584m N 0.726