GSVIVG00013699001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00013699001 T44663_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00013699001 RRM 15 85
GSVIVT00013699001 RRM 103 172
GSVIVT00013699001 RRM 194 263
GSVIVT00013699001 RRM 298 367

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.808
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.808
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.794
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.776
MDP0000286821 Malus x domestica MDP0000286821 N 0.762
MDP0000212007 Malus x domestica MDP0000212007 N 0.758
B9GT62_POPTR Populus trichocarpa POPTR_0002s06340 N 0.758
ppa002584m Prunus persica ppa002584m N 0.751
28644.m000904 Ricinus communis 28644.m000904 N 0.744
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.744
Glyma02g08480.1 Glycine max Glyma02g08480.1 N 0.737
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.730
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.715
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.708
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.708
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.705
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.705
30170.m013847 Ricinus communis 30170.m013847 N 0.705
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.705
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.705
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.702
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.702