28644.m000904 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 28644.m000904 T48638_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
28644.m000904 RRM 47 117
28644.m000904 RRM 135 204
28644.m000904 RRM 226 294
28644.m000904 RRM 330 399

Links

Other RRM family RBPs
Other Ricinus communis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava31766.valid.m1 Manihot esculenta cassava31766.valid.m1 N 0.829
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.797
Glyma20g31120.1 Glycine max Glyma20g31120.1 N 0.794
B9GT62_POPTR Populus trichocarpa POPTR_0002s06340 N 0.779
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.757
Glyma02g08480.1 Glycine max Glyma02g08480.1 N 0.744
GSVIVG00013699001 Vitis vinifera GSVIVG00013699001 N 0.744
Glyma16g27670.1 Glycine max Glyma16g27670.1 N 0.726
MDP0000212007 Malus x domestica MDP0000212007 N 0.726
MDP0000286821 Malus x domestica MDP0000286821 N 0.726
ppa002584m Prunus persica ppa002584m N 0.726
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.715
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.712
29801.m003152 Ricinus communis 29801.m003152 N 0.712
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.708
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.705
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.705
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.705
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.701
AC233576_3 Medicago truncatula AC233576_3 N 0.701
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.701