e_gw1.17.425.1 (Trichoderma virens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.17.425.1 T49817_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.17.425.1 RRM 66 136

Links

Other RRM family RBPs
Other Trichoderma virens RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Bm1_51375 Brugia malayi Bm1_51375 N 0.000
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.000
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.000
KRR1 Sorex araneus ENSSARG00000009967 N 0.000
KRR1 Sus scrofa ENSSSCG00000000520 N 0.000
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.000
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.000
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.000
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.000
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.000
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.000
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.000
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.000
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.000
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.000
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.000
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.000
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.000
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.000
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.000
LOAG_07118 Loa loa LOAG_07118 N 0.000
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.000
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.000
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.000
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.000
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.000
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.000
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.000
LOC100050169 Equus caballus ENSECAG00000017498 N 0.000
KRR1 Felis catus ENSFCAG00000005207 N 0.000
KRR1 Homo sapiens ENSG00000111615 N 0.000
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.000
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.000
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.000
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.000
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.000
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.000
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.000