estExt_fgenesh4_pg.C_90052 (Volvox carteri)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_fgenesh4_pg.C_90052 T20914_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh4_pg.C_90052 KH 140 190

Links

Other KH family RBPs
Other Volvox carteri RBPs

146 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.902
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.843
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.843
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.843
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.843
PK22510.1 Cannabis sativa PK22510.1 N 0.824
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.824
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.824
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.824
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.824
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.824
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.804
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.804
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.804
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.804
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.804
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.804
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.804
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.804
KRR1 Saccharomyces cerevisiae YCL059C N 0.804
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.804
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.804
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.804
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.804
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.804
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.788
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.784
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.784
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.784
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.784
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.784
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.784
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.784
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.784
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.784
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.784
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.784
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.784
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.784
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.784
Krr1 Mus musculus ENSMUSG00000063334 N 0.784
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.784
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.784
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.784
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.784
LOC100050169 Equus caballus ENSECAG00000017498 N 0.784
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.784
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.784
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.784
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.784
KRR1 Danio rerio ENSDARG00000011246 N 0.784
KRR1 Felis catus ENSFCAG00000005207 N 0.784
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.784
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.784
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.784
KRR1 Sus scrofa ENSSSCG00000000520 N 0.784
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.784
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.784
KRR1 Homo sapiens ENSG00000111615 N 0.784
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.784
KRR1 Sorex araneus ENSSARG00000009967 N 0.784
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.765
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.765
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.765
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.765
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.765
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.765
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.765
GE15854 Drosophila yakuba FBgn0233416 N 0.765
GK24616 Drosophila willistoni FBgn0226576 N 0.765
GG24622 Drosophila erecta FBgn0116754 N 0.765
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.765
GI18007 Drosophila mojavensis FBgn0140747 N 0.765
GL18627 Drosophila persimilis FBgn0156228 N 0.765
GJ19628 Drosophila virilis FBgn0206770 N 0.765
dbe Drosophila melanogaster FBgn0020305 N 0.765
AGAP007912 Anopheles gambiae AGAP007912 N 0.765
CTRG_04103 Candida tropicalis CTRG_04103 N 0.765
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.765
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.765
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.765
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.765
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.765
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.765
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.765
EDP43963.1 Malassezia globosa EDP43963.1 N 0.765
KRR1 Candida albicans orf19.661 N 0.765
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.765
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.765
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.759
XP_002489989.1 Pichia pastoris XP_002489989.1 N 0.755
PASA_GEN_0400107 Daphnia pulex PASA_GEN_0400107 N 0.754
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.745
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.745
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.745
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.745
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.745
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.745
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.745
MDP0000221204 Malus x domestica MDP0000221204 N 0.745
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.745
MDP0000130613 Malus x domestica MDP0000130613 N 0.745
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.745
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.745
UM03241 Ustilago maydis UM03241 N 0.745
CMR456C Cyanidioschyzon merolae CMR456C N 0.745
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.745
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.741
gw1.1.562.1 Micromonas pusilla gw1.1.562.1 N 0.736
KRR1 Oryzias latipes ENSORLG00000019616 N 0.732
fgeneshTA2_pg.C_scaffold_1000697 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_1000697 N 0.731
e_gw1.7.987.1 Fragilariopsis cylindrus e_gw1.7.987.1 N 0.731
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.725
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.725
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.725
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.725
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.725
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.725
YALI0F30393g Yarrowia lipolytica YALI0F30393g N 0.725
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.725
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.725
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.725
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.725
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.725
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.725
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.725
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.725
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.725
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.725
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.725
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.725
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.725
GSTUMT00008009001 Tuber melanosporum GSTUMT00008009001 N 0.707
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.706
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.706
ENSETEG00000001656 Echinops telfairi ENSETEG00000001656 N 0.706
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.706
KRR1 Procavia capensis ENSPCAG00000010269 N 0.706
Bm1_51375 Brugia malayi Bm1_51375 N 0.706
WUBG_00259 Wuchereria bancrofti WUBG_00259 N 0.706
NCU07041 Neurospora crassa NCU07041 N 0.706
CMU_000450 Cryptosporidium muris CMU_000450 N 0.706
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.706
KRR1 Microcebus murinus ENSMICG00000015127 N 0.706
estExt_Genewise1Plus.C_20041 Sporobolomyces roseus estExt_Genewise1Plus.C_20041 N 0.702
ANIA_05875 Aspergillus nidulans CADANIAG00007161 N 0.702