e_gw1.35.542.1 (Selaginella moellendorfii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 e_gw1.35.542.1 T20772_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.35.542.1 KH 159 209

Links

Other KH family RBPs
Other Selaginella moellendorfii RBPs

130 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.902
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.902
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.843
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.843
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.843
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.843
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.843
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.843
KRR1 Saccharomyces cerevisiae YCL059C N 0.843
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.843
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.843
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.824
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.824
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.824
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.824
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.824
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.824
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.824
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.824
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.804
KRR1 Candida albicans orf19.661 N 0.804
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.804
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.804
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.804
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.804
CTRG_04103 Candida tropicalis CTRG_04103 N 0.804
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.804
YALI0F30393g Yarrowia lipolytica YALI0F30393g N 0.804
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.796
XP_002489989.1 Pichia pastoris XP_002489989.1 N 0.792
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.788
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.784
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.784
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.784
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.784
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.765
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.765
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.765
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.765
KRR1 Homo sapiens ENSG00000111615 N 0.765
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.765
KRR1 Felis catus ENSFCAG00000005207 N 0.765
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.765
LOC100050169 Equus caballus ENSECAG00000017498 N 0.765
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.765
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.765
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.765
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.765
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.765
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.765
PK22510.1 Cannabis sativa PK22510.1 N 0.765
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.765
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.765
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.765
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.765
KRR1 Sus scrofa ENSSSCG00000000520 N 0.765
KRR1 Sorex araneus ENSSARG00000009967 N 0.765
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.765
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.765
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.765
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.765
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.765
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.765
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.765
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.765
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.765
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.765
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.765
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.765
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.765
NCU07041 Neurospora crassa NCU07041 N 0.765
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.765
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.765
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.745
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.745
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.745
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.745
Krr1 Mus musculus ENSMUSG00000063334 N 0.745
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.745
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.745
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.745
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.745
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.745
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.745
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.745
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.745
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.745
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.745
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.745
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.745
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.745
KRR1 Danio rerio ENSDARG00000011246 N 0.745
e_gw1.7.987.1 Fragilariopsis cylindrus e_gw1.7.987.1 N 0.731
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.725
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.725
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.725
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.725
EDP43963.1 Malassezia globosa EDP43963.1 N 0.725
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.725
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.725
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.725
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.725
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.725
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.725
UM03241 Ustilago maydis UM03241 N 0.725
MDP0000221204 Malus x domestica MDP0000221204 N 0.725
MDP0000130613 Malus x domestica MDP0000130613 N 0.725
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.725
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.722
PASA_GEN_0400107 Daphnia pulex PASA_GEN_0400107 N 0.719
ENSCSAVG00000008600 Ciona savignyi ENSCSAVG00000008600 N 0.712
SJAG_00657 Schizosaccharomyces japonicus SJAG_00657 N 0.709
GSTUMT00008009001 Tuber melanosporum GSTUMT00008009001 N 0.707
GK24616 Drosophila willistoni FBgn0226576 N 0.706
GE15854 Drosophila yakuba FBgn0233416 N 0.706
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.706
GJ19628 Drosophila virilis FBgn0206770 N 0.706
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.706
AMSG_07403 Thecamonas trahens AMSG_07403 N 0.706
Bm1_51375 Brugia malayi Bm1_51375 N 0.706
KRR1 Microcebus murinus ENSMICG00000015127 N 0.706
WUBG_00259 Wuchereria bancrofti WUBG_00259 N 0.706
KRR1 Procavia capensis ENSPCAG00000010269 N 0.706
ENSETEG00000001656 Echinops telfairi ENSETEG00000001656 N 0.706
GI18007 Drosophila mojavensis FBgn0140747 N 0.706
GG24622 Drosophila erecta FBgn0116754 N 0.706
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.706
GL18627 Drosophila persimilis FBgn0156228 N 0.706
dbe Drosophila melanogaster FBgn0020305 N 0.706
ANIA_05875 Aspergillus nidulans CADANIAG00007161 N 0.702