fgenesh1_pg.4_#_772 (Myceliophthora thermophila)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.4_#_772 T51745_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.4_#_772 RRM 202 254
fgenesh1_pg.4_#_772 RRM 293 350
fgenesh1_pg.4_#_772 RRM 427 492
fgenesh1_pg.4_#_772 RRM 518 581

Links

Other RRM family RBPs
Other Myceliophthora thermophila RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm2546 Apis mellifera amel4_ncbi_hmm2546 N 0.000
LARP6 Meleagris gallopavo ENSMGAG00000005077 N 0.000
LARP6 Monodelphis domestica ENSMODG00000009034 N 0.000
Larp6 Mus musculus ENSMUSG00000034839 N 0.000
LARP6 Oryctolagus cuniculus ENSOCUG00000009306 N 0.000
ENSOPRG00000004868 Ochotona princeps ENSOPRG00000004868 N 0.000
LARP6 Oryzias latipes ENSORLG00000014256 N 0.000
Larp6 Rattus norvegicus ENSRNOG00000012438 N 0.000
LARP6 Taeniopygia guttata ENSTGUG00000005808 N 0.000
LARP6 Tetraodon nigroviridis ENSTNIG00000011926 N 0.000
LARP6 Takifugu rubripes ENSTRUG00000003151 N 0.000
SNAPOd2T00012503001 Oikopleura dioica SNAPOd2T00012503001 N 0.000
BGIBMGA013975 Bombyx mori BGIBMGA013975 N 0.000
LARP6 Macropus eugenii ENSMEUG00000002270 N 0.000
LARP6 Loxodonta africana ENSLAFG00000016343 N 0.000
DGIL_AUG5s14155g1t1 Acyrtosiphon pisum DGIL_AUG5s14155g1t1 N 0.000
LARP6 Anolis carolinensis ENSACAG00000008613 N 0.000
LARP6 Choloepus hoffmanni ENSCHOG00000003318 N 0.000
LARP6 Cavia porcellus ENSCPOG00000022687 N 0.000
ENSCSAVG00000011718 Ciona savignyi ENSCSAVG00000011718 N 0.000
larp6 Danio rerio ENSDARG00000005355 N 0.000
Larp6 Dipodomys ordii ENSDORG00000012663 N 0.000
LARP6 Echinops telfairi ENSETEG00000020390 N 0.000
LARP6 Felis catus ENSFCAG00000001361 N 0.000
LARP6 Gasterosteus aculeatus ENSGACG00000014622 N 0.000
LARP6 Gallus gallus ENSGALG00000004046 N 0.000
LOC420093 Gallus gallus ENSGALG00000024381 N 0.000
Ame_R010574 Ailuropoda melanoleuca Ame_R010574 N 0.000