CBN24850 (Caenorhabditis brenneri)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CBN24850 T02150_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CBN24850 CCCH ZF 101 127
CBN24850 CCCH ZF 144 170

Links

Other CCCH ZF family RBPs
Other Caenorhabditis brenneri RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG11249 Caenorhabditis briggsae CBG11249 N 0.944
CBG20851 Caenorhabditis briggsae CBG20851 N 0.778
CBG23753 Caenorhabditis briggsae CBG23753 N 0.963
CBN18470 Caenorhabditis brenneri CBN18470 N 1.000
CBN23640 Caenorhabditis brenneri CBN23640 N 0.778
ccch-2 Caenorhabditis elegans F38C2.5 N 0.704
ccch-5 Caenorhabditis elegans Y57G11C.25 N 0.722
CJA09680 Caenorhabditis japonica CJA09680 N 0.944
CJA11631 Caenorhabditis japonica CJA11631 N 0.778
CRE05531 Caenorhabditis remanei CRE05531 N 0.981
CRE26079 Caenorhabditis remanei CRE26079 N 0.796
dct-13 Caenorhabditis elegans Y116A8C.17 N 0.759
mex-1 Caenorhabditis elegans W03C9.7 N 0.741
pos-1 Caenorhabditis elegans F52E1.1 N 0.889
Y116A8C.19 Caenorhabditis elegans Y116A8C.19 N 0.759
Y116A8C.20 Caenorhabditis elegans Y116A8C.20 N 0.796