CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MBNL2
(
Dasypus novemcinctus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSDNOG00000018141
T02490_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000014073
CCCH ZF
16
40
LEVCRQFQRGTCSRSDEECKFAHPP
ENSDNOP00000014073
CCCH ZF
177
203
DKLEVCREFQRGNCARGETDCRFAHPA
ENSDNOP00000014073
CCCH ZF
215
237
VTVCMDYIKGRCMREKCKYFHPP
Links
Other
CCCH ZF
family RBPs
Other
Dasypus novemcinctus
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB07703.1
Alternaria brassicicola
AB07703.1
N
0.000
ACLA_016930
Aspergillus clavatus
CADACLAG00000891
N
0.000
AFUA_5G13930
Aspergillus fumigatus
CADAFUAG00006431
N
0.000
An14g05330
Aspergillus niger
CADANGAG00011470
N
0.000
ANIA_06922
Aspergillus nidulans
CADANIAG00007728
N
0.000
ARB_01723
Arthroderma benhamiae
ARB_01723
N
0.000
ATEG_06133
Aspergillus terreus
CADATEAG00002525
N
0.000
BC1G_06447
Botrytis cinerea
BC1G_06447
N
0.000
Bm1_13920
Brugia malayi
Bm1_13920
N
0.000
CAGL0J08679g
Candida glabrata
CAGL0J08679g
N
0.000
CHGG_07887
Chaetomium globosum
CHGG_07887
N
0.000
CIMG_09790
Coccidioides immitis
CIMG_09790
N
0.000
CPSG_09723
Coccidioides posadasii
CPSG_09723
N
0.000
estExt_fgenesh1_pg.C_40101
Trichoderma atroviride
estExt_fgenesh1_pg.C_40101
N
0.000
estExt_fgenesh1_pg.C_70448
Myceliophthora thermophila
estExt_fgenesh1_pg.C_70448
N
0.000
estExt_fgenesh1_pm.C_130118
Neurospora tetrasperma
estExt_fgenesh1_pm.C_130118
N
0.000
estExt_fgenesh1_pm.C_chr_90145
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_90145
N
0.000
estExt_fgenesh2_kg.C_60126
Thielavia terrestris
estExt_fgenesh2_kg.C_60126
N
0.000
estExt_Genewise1.C_110154
Neurospora discreta
estExt_Genewise1.C_110154
N
0.000
estExt_Genewise1.C_210247
Trichoderma reesei
estExt_Genewise1.C_210247
N
0.000
estExt_Genewise1.C_22051
Cryphonectria parasitica
estExt_Genewise1.C_22051
N
0.000
estExt_Genewise1.C_30385
Mucor circinelloides
estExt_Genewise1.C_30385
N
0.000
estExt_Genewise1.C_60471
Cochliobolus heterostrophus C5
estExt_Genewise1.C_60471
N
0.000
estExt_Genewise1Plus.C_31385
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_31385
N
0.000
e_gw1.8.939.1
Pleurotus ostreatus
e_gw1.8.939.1
N
0.000
fgenesh1_pg.00710_#_148
Aspergillus carbonarius
fgenesh1_pg.00710_#_148
N
0.000
gw1.23.236.1
Trichoderma virens
gw1.23.236.1
N
0.000
LOAG_00784
Loa loa
LOAG_00784
N
0.000
MCYG_02954
Microsporum canis
MCYG_02954
N
0.000
MGG_07010
Magnaporthe oryzae
MGG_07010
N
0.000
MGYG_00125
Microsporum gypseum
MGYG_00125
N
0.000
NCU01795
Neurospora crassa
NCU01795
N
0.000
NFIA_073040
Neosartorya fischeri
CADNFIAG00007899
N
0.000
PABG_07629
Paracoccidioides brasiliensis
PABG_07629
N
0.000
Pa_3_8730
Podospora anserina
Pa_3_8730
N
0.000
Pc21g03130
Penicillium chrysogenum
Pc21g03130
N
0.000
PMAA_036360
Penicillium marneffei
PMAA_036360
N
0.000
SS1G_13466
Sclerotinia sclerotiorum
SS1G_13466
N
0.000
TEQG_08385
Trichophyton equinum
TEQG_08385
N
0.000
TERG_01412
Trichophyton rubrum
TERG_01412
N
0.000
TESG_03135
Trichophyton tonsurans
TESG_03135
N
0.000
TRV_03417
Trichophyton verrucosum
TRV_03417
N
0.000
UREG_04706
Uncinocarpus reesii
UREG_04706
N
0.000
VDAG_08863
Verticillium dahliae
VDAG_08863
N
0.000
VDBG_05241
Verticillium albo atrum
VDBG_05241
N
0.000
WUBG_13399
Wuchereria bancrofti
WUBG_13399
N
0.000
zc3h15
Xenopus tropicalis
ENSXETG00000013336
N
0.000
ZC3H15
Anolis carolinensis
ENSACAG00000001916
N
0.000