Mkrn2 (Rattus norvegicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSRNOG00000009176 T03311_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000013145 CCCH ZF 3 28
ENSRNOP00000013145 CCCH ZF 34 57
ENSRNOP00000013145 CCCH ZF 168 192
ENSRNOP00000013145 CCCH ZF 324 349
ENSRNOP00000042673 CCCH ZF 9 28
ENSRNOP00000042673 CCCH ZF 34 57
ENSRNOP00000042673 CCCH ZF 168 192
ENSRNOP00000042673 CCCH ZF 324 349

Links

Other CCCH ZF family RBPs
Other Rattus norvegicus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI06425 Xenopus laevis AAI06425 N 0.728
ABR68861 Xenopus laevis ABR68861 N 0.738
Ame_R009492 Ailuropoda melanoleuca Ame_R009492 N 0.896
B0F0H3 Xenopus laevis B0F0H3 N 0.738
ENSPPYG00000013387 Pongo pygmaeus ENSPPYG00000013387 N 0.971
LOC100057038 Equus caballus ENSECAG00000024404 N 0.905
MKRN2 Taeniopygia guttata ENSTGUG00000004017 N 0.794
Mkrn2 Mus musculus ENSMUSG00000000439 N 0.990
MKRN2 Oryctolagus cuniculus ENSOCUG00000014171 N 0.951
MKRN2 Ochotona princeps ENSOPRG00000003501 N 0.960
MKRN2 Oryzias latipes ENSORLG00000009824 N 0.728
MKRN2 Procavia capensis ENSPCAG00000016175 N 0.931
MKRN2 Vicugna pacos ENSVPAG00000011064 N 0.931
MKRN2 Pan troglodytes ENSPTRG00000014634 N 0.960
MKRN2 Tarsius syrichta ENSTSYG00000007429 N 0.948
MKRN2 Macaca mulatta ENSMMUG00000009536 N 0.960
MKRN2 Myotis lucifugus ENSMLUG00000017643 N 0.882
MKRN2 Loxodonta africana ENSLAFG00000011601 N 0.918
MKRN2 Canis familiaris ENSCAFG00000004967 N 0.951
MKRN2 Choloepus hoffmanni ENSCHOG00000005438 N 0.951
MKRN2 Callithrix jacchus ENSCJAG00000016733 N 0.948
MKRN2 Cavia porcellus ENSCPOG00000001208 N 0.939
mkrn2 Danio rerio ENSDARG00000007630 N 0.755
Mkrn2 Dipodomys ordii ENSDORG00000015621 N 0.887
MKRN2 Erinaceus europaeus ENSEEUG00000002217 N 0.853
MKRN2 Echinops telfairi ENSETEG00000003970 N 0.856
MKRN2 Felis catus ENSFCAG00000007979 N 0.938
MKRN2 Homo sapiens ENSG00000075975 N 0.960
MKRN2 Gasterosteus aculeatus ENSGACG00000003396 N 0.755
MKRN2 Gorilla gorilla ENSGGOG00000000429 N 0.960
MKRN2 Anolis carolinensis ENSACAG00000013310 N 0.796
NP_001072101.1 Takifugu rubripes ENSTRUG00000003156 N 0.725
Q2YDI8_BOVIN Bos taurus ENSBTAG00000004512 N 0.941
Q8UWH3_CHICK Gallus gallus ENSGALG00000004991 N 0.816