CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
gw1.780.2.1
(
Capitella teleta
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
gw1.780.2.1
T05559_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.780.2.1
CCCH ZF
418
444
YKTSLCRDLSRTGSCPRGSNCTFAHSQ
Links
Other
CCCH ZF
family RBPs
Other
Capitella teleta
RBPs
60 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EEB88731.1
Moniliophthora perniciosa
EEB88731.1
N
0.000
EEB88734.1
Moniliophthora perniciosa
EEB88734.1
N
0.000
EEB88782.1
Moniliophthora perniciosa
EEB88782.1
N
0.000
EEB88827.1
Moniliophthora perniciosa
EEB88827.1
N
0.000
EEB88856.1
Moniliophthora perniciosa
EEB88856.1
N
0.000
EEB89022.1
Moniliophthora perniciosa
EEB89022.1
N
0.000
EEB89072.1
Moniliophthora perniciosa
EEB89072.1
N
0.000
EEB89663.1
Moniliophthora perniciosa
EEB89663.1
N
0.000
EEB89900.1
Moniliophthora perniciosa
EEB89900.1
N
0.000
PTTG_10798
Puccinia triticina
PTTG_10798
N
0.000