Sjc_0008870 (Schistosoma japonicum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Sjc_0008870 T05814_0.6 SDSPB (2008-Sep-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000000830 CCCH ZF 63 86
CPRT0000000830 CCCH ZF 110 128
CPRT0000000830 CCCH ZF 256 282

Links

Other CCCH ZF family RBPs
Other Schistosoma japonicum RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s17350g1t1 Acyrtosiphon pisum DGIL_AUG5s17350g1t1 N 0.000
ENSCSAVG00000004843 Ciona savignyi ENSCSAVG00000004843 N 0.000
e_gw.10.245.1 Nematostella vectensis e_gw.10.245.1 N 0.714
fgenesh2_pg.scaffold_5000153 Branchiostoma floridae fgenesh2_pg.scaffold_5000153 N 0.700
GK12832 Drosophila willistoni FBgn0214841 N 0.700
nasonia_NCBI_hmm1068274 Nasonia vitripennis nasonia_NCBI_hmm1068274 N 0.729
Smp_154250 Schistosoma mansoni Smp_154250 N 1.000
UNK Microcebus murinus ENSMICG00000007591 N 0.729
UNK Erinaceus europaeus ENSEEUG00000013779 N 0.000
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.757
XP_001180099.1 Strongylocentrotus purpuratus XP_001180099.1 N 0.757
XP_789013.2 Strongylocentrotus purpuratus XP_789013.2 N 0.757
XR_022366.1 Pan troglodytes ENSPTRG00000007591 N 0.757