PredSwiss_EST660.1 (Pneumocystis carinii)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		PredSwiss_EST660.1 T07055_0.6 Pneumocystis Genome Project (2010-Oct-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_EST660.1 KH 166 248
PredSwiss_EST660.1 CCHC ZF 286 303
PredSwiss_EST660.1 CCHC ZF 311 326

Links

Other CCHC ZF,KH family RBPs
Other Pneumocystis carinii RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB04099.1 Alternaria brassicicola AB04099.1 N 0.767
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.783
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.783
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.792
An02g06570 Aspergillus niger CADANGAG00002175 N 0.783
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.783
BC1G_07392 Botrytis cinerea BC1G_07392 N 0.775
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.783
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.815
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.800
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.792
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.792
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.775
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.792
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.792
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.808
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.758
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.798
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.783
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.800
MCYG_00821 Microsporum canis MCYG_00821 N 0.767
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.783
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.775
NCU04110 Neurospora crassa NCU04110 N 0.792
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.783
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.792
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.783
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.767
PredSwiss_CON369.1 Pneumocystis carinii PredSwiss_CON369.1 N 0.872
PTRG_00022 Pyrenophora tritici repentis PTRG_00022 N 0.767
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.815
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.798
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.790
SS1G_07196 Sclerotinia sclerotiorum SS1G_07196 N 0.775
TERG_00369 Trichophyton rubrum TERG_00369 N 0.775
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.792
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.792