SS1G_07196 (Sclerotinia sclerotiorum)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		SS1G_07196 T06960_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_07196 KH 188 271
SS1T_07196 CCHC ZF 309 326
SS1T_07196 CCHC ZF 334 351

Links

Other CCHC ZF,KH family RBPs
Other Sclerotinia sclerotiorum RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_07392 Botrytis cinerea BC1G_07392 N 1.000
AB04099.1 Alternaria brassicicola AB04099.1 N 0.983
PTRG_00022 Pyrenophora tritici repentis PTRG_00022 N 0.975
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.967
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.958
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.958
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.958
NCU04110 Neurospora crassa NCU04110 N 0.958
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.958
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.958
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.950
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.950
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.950
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.950
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.950
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.950
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.950
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.942
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.942
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.942
An02g06570 Aspergillus niger CADANGAG00002175 N 0.942
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.942
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.942
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.942
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.942
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.933
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.933
MCYG_00821 Microsporum canis MCYG_00821 N 0.933
TERG_00369 Trichophyton rubrum TERG_00369 N 0.925
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.925
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.925
SNOG_11729 Stagonospora nodorum SNOG_11729 N 0.883
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.825
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.817
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.792
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.792
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.783
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.775
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.733
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.733
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.725
estExt_Genewise1.C_12313 Neurospora discreta estExt_Genewise1.C_12313 N 0.725
e_gw1.6.74.1 Phycomyces blakesleeanus e_gw1.6.74.1 N 0.700