AB04099.1 (Alternaria brassicicola)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		AB04099.1 T07063_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AB04099.1 KH 178 261
AB04099.1 CCHC ZF 299 316
AB04099.1 CCHC ZF 324 341

Links

Other CCHC ZF,KH family RBPs
Other Alternaria brassicicola RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTRG_00022 Pyrenophora tritici repentis PTRG_00022 N 0.992
SS1G_07196 Sclerotinia sclerotiorum SS1G_07196 N 0.983
EAT80773.2 Phaeosphaeria nodorum EAT80773.2 N 0.983
BC1G_07392 Botrytis cinerea BC1G_07392 N 0.983
estExt_Genewise1.C_12889 Cryphonectria parasitica estExt_Genewise1.C_12889 N 0.958
GSTUMT00005703001 Tuber melanosporum GSTUMT00005703001 N 0.958
NCU04110 Neurospora crassa NCU04110 N 0.958
estExt_fgenesh1_pm.C_10341 Neurospora tetrasperma estExt_fgenesh1_pm.C_10341 N 0.958
Pa_2_3850 Podospora anserina Pa_2_3850 N 0.958
BDBG_03134 Blastomyces dermatitidis BDBG_03134 N 0.958
ANIA_10615 Aspergillus nidulans CADANIAG00005496 N 0.950
CPSG_03514 Coccidioides posadasii CPSG_03514 N 0.950
VDBG_09415 Verticillium albo atrum VDBG_09415 N 0.950
Pc18g00800 Penicillium chrysogenum Pc18g00800 N 0.950
AFLA_031810 Aspergillus flavus CADAFLAG00002556 N 0.950
CIMG_03768 Coccidioides immitis CIMG_03768 N 0.950
VDAG_04652 Verticillium dahliae VDAG_04652 N 0.950
NFIA_066410 Neosartorya fischeri CADNFIAG00006460 N 0.942
estExt_Genewise1Plus.C_22270 Thielavia terrestris estExt_Genewise1Plus.C_22270 N 0.942
GLRG_01222 Colletotrichum graminicola GLRG_01222 N 0.942
CHGG_07335 Chaetomium globosum CHGG_07335 N 0.942
AFUA_3G10840 Aspergillus fumigatus CADAFUAG00005564 N 0.942
ACLA_038770 Aspergillus clavatus CADACLAG00003525 N 0.942
MGG_06748 Magnaporthe oryzae MGG_06748 N 0.942
An02g06570 Aspergillus niger CADANGAG00002175 N 0.942
MCYG_00821 Microsporum canis MCYG_00821 N 0.933
PMAA_023720 Penicillium marneffei PMAA_023720 N 0.933
estExt_Genewise1Plus.C_chr_50382 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_50382 N 0.933
MGYG_01149 Microsporum gypseum MGYG_01149 N 0.925
FGSG_02080 Fusarium graminearum FGSG_02080 N 0.925
TERG_00369 Trichophyton rubrum TERG_00369 N 0.925
SNOG_11729 Stagonospora nodorum SNOG_11729 N 0.900
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.825
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.817
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.792
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.792
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.783
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.767
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.733
SPOG_03392 Schizosaccharomyces cryophilus SPOG_03392 N 0.725
estExt_Genewise1.C_12313 Neurospora discreta estExt_Genewise1.C_12313 N 0.725
SOCG_03845 Schizosaccharomyces octosporus SOCG_03845 N 0.725
e_gw1.6.74.1 Phycomyces blakesleeanus e_gw1.6.74.1 N 0.700