PTTG_08342 (Puccinia triticina)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PTTG_08342 T08427_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTTG_08342T0 CCHC ZF 229 246

Links

Other CCHC ZF family RBPs
Other Puccinia triticina RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
161590 Helobdella robusta 161590 N 0.000
AT3G21030 Arabidopsis thaliana AT3G21030-TAIR-G N 0.000
CC1G_11952 Coprinopsis cinerea CC1G_11952 N 0.833
CIMG_13627 Coccidioides immitis CIMG_13627 N 0.722
CJA16826 Caenorhabditis japonica CJA16826 N 0.000
CPSG_04175 Coccidioides posadasii CPSG_04175 N 0.722
EDI_146150 Entamoeba dispar EDI_146150 N 0.000
EHI_007320 Entamoeba histolytica EHI_007320 N 0.000
gm1.300904 Emiliania huxleyi gm1.300904 N 0.000
LOC_Os10g20570 Oryza sativa LOC_Os10g20570 N 0.722
LOC_Os10g25990 Oryza sativa LOC_Os10g25990 N 0.000
PGTG_16909 Puccinia graminis PGTG_16909 N 0.000
PTTG_01003 Puccinia triticina PTTG_01003 N 0.778
PTTG_03398 Puccinia triticina PTTG_03398 N 0.000
PTTG_03581 Puccinia triticina PTTG_03581 N 0.889
PTTG_03611 Puccinia triticina PTTG_03611 N 0.833
PTTG_04681 Puccinia triticina PTTG_04681 N 0.889
PTTG_05127 Puccinia triticina PTTG_05127 N 0.944
PTTG_05245 Puccinia triticina PTTG_05245 N 0.833
PTTG_05279 Puccinia triticina PTTG_05279 N 0.778
PTTG_05476 Puccinia triticina PTTG_05476 N 0.778
PTTG_06000 Puccinia triticina PTTG_06000 N 1.000
PTTG_06629 Puccinia triticina PTTG_06629 N 1.000
PTTG_06677 Puccinia triticina PTTG_06677 N 0.778
PTTG_07053 Puccinia triticina PTTG_07053 N 0.889
PTTG_07232 Puccinia triticina PTTG_07232 N 0.778
PTTG_08329 Puccinia triticina PTTG_08329 N 0.944
PTTG_08960 Puccinia triticina PTTG_08960 N 0.833
PTTG_08980 Puccinia triticina PTTG_08980 N 0.778
PTTG_09062 Puccinia triticina PTTG_09062 N 0.944
PTTG_09070 Puccinia triticina PTTG_09070 N 0.778
PTTG_09362 Puccinia triticina PTTG_09362 N 0.778
PTTG_09697 Puccinia triticina PTTG_09697 N 0.944
PTTG_10004 Puccinia triticina PTTG_10004 N 0.944
PTTG_10119 Puccinia triticina PTTG_10119 N 0.778
PTTG_10278 Puccinia triticina PTTG_10278 N 0.000
PTTG_10291 Puccinia triticina PTTG_10291 N 0.778
PTTG_10344 Puccinia triticina PTTG_10344 N 0.944
PTTG_10645 Puccinia triticina PTTG_10645 N 0.722
PTTG_10688 Puccinia triticina PTTG_10688 N 0.833
PTTG_10706 Puccinia triticina PTTG_10706 N 0.833
PTTG_11204 Puccinia triticina PTTG_11204 N 0.778
TcIL3000.0.47130 Trypanosoma congolense TcIL3000.0.47130 N 0.000
TcIL3000.0.60500 Trypanosoma congolense TcIL3000.0.60500 N 0.000