LOC_Os06g32090 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g32090 T11662_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g32090.1 CCHC ZF 219 236
LOC_Os06g32090.1 CCHC ZF 310 327
LOC_Os06g32090.1 CCHC ZF 346 362
LOC_Os06g32090.1 CCHC ZF 418 435

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A5YBM9_HORSE Equus caballus ENSECAG00000015345 N 0.000
AAD16971 Xenopus laevis AAD16971 N 0.000
AAH60391 Xenopus laevis AAH60391 N 0.000
AAH81153 Xenopus laevis AAH81153 N 0.000
AAH97507 Xenopus laevis AAH97507 N 0.000
Ame_R002022 Ailuropoda melanoleuca Ame_R002022 N 0.000
Ame_R009021 Ailuropoda melanoleuca Ame_R009021 N 0.000
ENSPPYG00000006553 Pongo pygmaeus ENSPPYG00000006553 N 0.000
ENSPPYG00000018487 Pongo pygmaeus ENSPPYG00000018487 N 0.000
ENSXETG00000010668 Xenopus tropicalis ENSXETG00000010668 N 0.000
e_gw.368.37.1 Branchiostoma floridae e_gw.368.37.1 I 0.000
LOC100392847 Callithrix jacchus ENSCJAG00000012366 N 0.000
LOC100409527 Callithrix jacchus ENSCJAG00000005200 N 0.000
Q2KI55_BOVIN Bos taurus ENSBTAG00000033727 N 0.000
Q9YGP5 Xenopus laevis Q9YGP5 N 0.000
RBPMS Procavia capensis ENSPCAG00000013493 N 0.000
RBPMS Oryzias latipes ENSORLG00000004135 N 0.000
RBPMS Ochotona princeps ENSOPRG00000013151 N 0.000
RBPMS Oryctolagus cuniculus ENSOCUG00000008572 N 0.000
RBPMS Meleagris gallopavo ENSMGAG00000005088 N 0.000
Rbpms Mus musculus ENSMUSG00000031586 N 0.000
RBPMS Monodelphis domestica ENSMODG00000019006 N 0.000
RBPMS Pan troglodytes ENSPTRG00000020135 N 0.000
RBPMS Pteropus vampyrus ENSPVAG00000001661 N 0.000
rbpms Xenopus tropicalis ENSXETG00000011290 N 0.000
RBPMS Vicugna pacos ENSVPAG00000010991 N 0.000
RBPMS Tursiops truncatus ENSTTRG00000012451 N 0.000
RBPMS Tarsius syrichta ENSTSYG00000013982 N 0.000
RBPMS Takifugu rubripes ENSTRUG00000000041 N 0.000
RBPMS Taeniopygia guttata ENSTGUG00000001776 N 0.000
RBPMS Sus scrofa ENSSSCG00000015846 N 0.000
RBPMS Sorex araneus ENSSARG00000000274 N 0.000
RBPMS Macaca mulatta ENSMMUG00000000458 N 0.000
RBPMS Homo sapiens ENSG00000157110 N 0.000
RBPMS Echinops telfairi ENSETEG00000017582 N 0.000
RBPMS Gasterosteus aculeatus ENSGACG00000019471 N 0.000
RBPMS Equus caballus ENSECAG00000020735 N 0.000
RBPMS Gallus gallus ENSGALG00000010291 N 0.000
RBPMS Cavia porcellus ENSCPOG00000012799 N 0.000
RBPMS Loxodonta africana ENSLAFG00000000209 N 0.000
RBPMS Choloepus hoffmanni ENSCHOG00000008745 N 0.000
RBPMS Canis familiaris ENSCAFG00000006503 N 0.000
RBPMS Anolis carolinensis ENSACAG00000003012 N 0.000
RBPMS Myotis lucifugus ENSMLUG00000009391 N 0.000
RBPMS2 Canis familiaris ENSCAFG00000017098 N 0.000
RBPMS2 Felis catus ENSFCAG00000011333 N 0.000
RBPMS2 Taeniopygia guttata ENSTGUG00000004722 N 0.000
RBPMS2 Echinops telfairi ENSETEG00000010176 N 0.000
RBPMS2 Takifugu rubripes ENSTRUG00000016625 N 0.000
RBPMS2 Anolis carolinensis ENSACAG00000012227 N 0.000
RBPMS2 Tursiops truncatus ENSTTRG00000011840 N 0.000
Rbpms2 Dipodomys ordii ENSDORG00000004025 N 0.000
rbpms2 Danio rerio ENSDARG00000079578 N 0.000
RBPMS2 Bos taurus ENSBTAG00000011037 N 0.000
RBPMS2 Cavia porcellus ENSCPOG00000007695 N 0.000
RBPMS2 Danio rerio ENSDARG00000045930 N 0.000
RBPMS2 Spermophilus tridecemlineatus ENSSTOG00000010055 N 0.000
RBPMS2 Sus scrofa ENSSSCG00000004549 N 0.000
RBPMS2 Oryzias latipes ENSORLG00000001493 N 0.000
RBPMS2 Ochotona princeps ENSOPRG00000013668 N 0.000
RBPMS2 Oryctolagus cuniculus ENSOCUG00000010388 N 0.000
RBPMS2 Loxodonta africana ENSLAFG00000018725 N 0.000
RBPMS2 Meleagris gallopavo ENSMGAG00000001128 N 0.000
Rbpms2 Mus musculus ENSMUSG00000032387 N 0.000
RBPMS2 Microcebus murinus ENSMICG00000007355 N 0.000
RBPMS2 Macaca mulatta ENSMMUG00000013270 N 0.000
RBPMS2 Gorilla gorilla ENSGGOG00000008984 N 0.000
RBPMS2 Procavia capensis ENSPCAG00000015797 N 0.000
RBPMS2 Homo sapiens ENSG00000166831 N 0.000
Rbpms2 Rattus norvegicus ENSRNOG00000015896 N 0.000
RBPMS2 Pteropus vampyrus ENSPVAG00000016622 N 0.000
RBPMS2 Gasterosteus aculeatus ENSGACG00000017472 N 0.000
RBPMS2 Pan troglodytes ENSPTRG00000007165 N 0.000
RBPMS2 Ornithorhynchus anatinus ENSOANG00000011802 N 0.000
RBPMS2 Myotis lucifugus ENSMLUG00000013394 N 0.000
RBPMS_CHICK Gallus gallus ENSGALG00000002355 N 0.000
RGD1561067 Rattus norvegicus ENSRNOG00000013328 N 0.000