CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBPMS2
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000004722
T41894_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000004863
RRM
4
68
LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALNGIRFDPEN
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
77 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBPMS_CHICK
Gallus gallus
ENSGALG00000002355
N
1.000
RBPMS2
Meleagris gallopavo
ENSMGAG00000001128
N
1.000
RBPMS2
Monodelphis domestica
ENSMODG00000010487
N
1.000
RBPMS2
Takifugu rubripes
ENSTRUG00000016625
N
0.985
RBPMS2
Anolis carolinensis
ENSACAG00000012227
N
0.985
RBPMS2
Danio rerio
ENSDARG00000045930
N
0.969
A5YBM9_HORSE
Equus caballus
ENSECAG00000015345
N
0.969
RBPMS2
Sus scrofa
ENSSSCG00000004549
N
0.969
RBPMS2
Procavia capensis
ENSPCAG00000015797
N
0.969
RBPMS2
Oryctolagus cuniculus
ENSOCUG00000010388
N
0.969
RBPMS2
Canis familiaris
ENSCAFG00000017098
N
0.969
RBPMS2
Ornithorhynchus anatinus
ENSOANG00000011802
N
0.969
RBPMS2
Loxodonta africana
ENSLAFG00000018725
N
0.969
RBPMS2
Myotis lucifugus
ENSMLUG00000013394
N
0.969
Rbpms2
Mus musculus
ENSMUSG00000032387
N
0.969
RBPMS2
Bos taurus
ENSBTAG00000011037
N
0.969
Rbpms2
Rattus norvegicus
ENSRNOG00000015896
N
0.969
RBPMS2
Felis catus
ENSFCAG00000011333
N
0.969
RBPMS2
Oryzias latipes
ENSORLG00000001493
N
0.969
RBPMS2
Tursiops truncatus
ENSTTRG00000011840
N
0.969
RBPMS2
Pteropus vampyrus
ENSPVAG00000016622
N
0.969
AAD16971
Xenopus laevis
AAD16971
N
0.969
Ame_R002022
Ailuropoda melanoleuca
Ame_R002022
N
0.969
ENSXETG00000010668
Xenopus tropicalis
ENSXETG00000010668
N
0.969
AAH81153
Xenopus laevis
AAH81153
N
0.969
Q9YGP5
Xenopus laevis
Q9YGP5
N
0.969
AAH97507
Xenopus laevis
AAH97507
N
0.969
Rbpms2
Dipodomys ordii
ENSDORG00000004025
N
0.955
RBPMS2
Pan troglodytes
ENSPTRG00000007165
N
0.954
RBPMS2
Gorilla gorilla
ENSGGOG00000008984
N
0.954
RBPMS2
Spermophilus tridecemlineatus
ENSSTOG00000010055
N
0.954
RBPMS2
Homo sapiens
ENSG00000166831
N
0.954
LOC100409527
Callithrix jacchus
ENSCJAG00000005200
N
0.954
rbpms2
Danio rerio
ENSDARG00000079578
N
0.954
RBPMS2
Macaca mulatta
ENSMMUG00000013270
N
0.954
RBPMS2
Gasterosteus aculeatus
ENSGACG00000017472
N
0.954
RBPMS2
Echinops telfairi
ENSETEG00000010176
N
0.954
RBPMS2
Microcebus murinus
ENSMICG00000007355
N
0.938
RBPMS2
Cavia porcellus
ENSCPOG00000007695
N
0.938
RGD1561067
Rattus norvegicus
ENSRNOG00000013328
N
0.923
RBPMS
Pteropus vampyrus
ENSPVAG00000001661
N
0.923
RBPMS
Monodelphis domestica
ENSMODG00000019006
N
0.923
RBPMS
Oryctolagus cuniculus
ENSOCUG00000008572
N
0.923
RBPMS
Ochotona princeps
ENSOPRG00000013151
N
0.923
RBPMS
Procavia capensis
ENSPCAG00000013493
N
0.923
ENSPPYG00000018487
Pongo pygmaeus
ENSPPYG00000018487
N
0.923
RBPMS
Sorex araneus
ENSSARG00000000274
N
0.923
RBPMS
Pan troglodytes
ENSPTRG00000020135
N
0.923
Rbpms
Mus musculus
ENSMUSG00000031586
N
0.923
RBPMS
Homo sapiens
ENSG00000157110
N
0.923
RBPMS
Anolis carolinensis
ENSACAG00000003012
N
0.923
Q2KI55_BOVIN
Bos taurus
ENSBTAG00000033727
N
0.923
RBPMS
Canis familiaris
ENSCAFG00000006503
N
0.923
RBPMS
Choloepus hoffmanni
ENSCHOG00000008745
N
0.923
AAH60391
Xenopus laevis
AAH60391
N
0.923
Ame_R009021
Ailuropoda melanoleuca
Ame_R009021
N
0.923
RBPMS
Taeniopygia guttata
ENSTGUG00000001776
N
0.923
RBPMS
Vicugna pacos
ENSVPAG00000010991
N
0.923
rbpms
Xenopus tropicalis
ENSXETG00000011290
N
0.923
RBPMS
Macaca mulatta
ENSMMUG00000000458
N
0.923
LOC100392847
Callithrix jacchus
ENSCJAG00000012366
N
0.923
RBPMS
Loxodonta africana
ENSLAFG00000000209
N
0.923
RBPMS
Meleagris gallopavo
ENSMGAG00000005088
N
0.923
RBPMS
Myotis lucifugus
ENSMLUG00000009391
N
0.923
RBPMS
Gallus gallus
ENSGALG00000010291
N
0.923
RBPMS
Sus scrofa
ENSSSCG00000015846
N
0.923
RBPMS
Cavia porcellus
ENSCPOG00000012799
N
0.923
RBPMS
Equus caballus
ENSECAG00000020735
N
0.923
RBPMS
Echinops telfairi
ENSETEG00000017582
N
0.923
RBPMS2
Ochotona princeps
ENSOPRG00000013668
N
0.909
RBPMS
Tursiops truncatus
ENSTTRG00000012451
N
0.908
RBPMS
Gasterosteus aculeatus
ENSGACG00000019471
N
0.892
RBPMS
Tarsius syrichta
ENSTSYG00000013982
N
0.892
RBPMS
Takifugu rubripes
ENSTRUG00000000041
N
0.892
RBPMS
Oryzias latipes
ENSORLG00000004135
N
0.892
e_gw.368.37.1
Branchiostoma floridae
e_gw.368.37.1
I
0.800
ENSPPYG00000006553
Pongo pygmaeus
ENSPPYG00000006553
N
0.757