CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBPMS2
(
Canis familiaris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCAFG00000017098
T35150_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000025180
RRM
37
101
LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALNGIRFDPEN
Links
Other
RRM
family RBPs
Other
Canis familiaris
RBPs
77 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBPMS2
Tursiops truncatus
ENSTTRG00000011840
N
1.000
A5YBM9_HORSE
Equus caballus
ENSECAG00000015345
N
1.000
RBPMS2
Myotis lucifugus
ENSMLUG00000013394
N
1.000
RBPMS2
Oryctolagus cuniculus
ENSOCUG00000010388
N
1.000
RBPMS2
Felis catus
ENSFCAG00000011333
N
1.000
Rbpms2
Rattus norvegicus
ENSRNOG00000015896
N
1.000
RBPMS2
Pteropus vampyrus
ENSPVAG00000016622
N
1.000
RBPMS2
Bos taurus
ENSBTAG00000011037
N
1.000
RBPMS2
Loxodonta africana
ENSLAFG00000018725
N
1.000
RBPMS2
Procavia capensis
ENSPCAG00000015797
N
1.000
Rbpms2
Mus musculus
ENSMUSG00000032387
N
1.000
RBPMS2
Sus scrofa
ENSSSCG00000004549
N
1.000
Ame_R002022
Ailuropoda melanoleuca
Ame_R002022
N
1.000
Rbpms2
Dipodomys ordii
ENSDORG00000004025
N
0.985
RBPMS2
Gorilla gorilla
ENSGGOG00000008984
N
0.985
RBPMS2
Macaca mulatta
ENSMMUG00000013270
N
0.985
RBPMS2
Pan troglodytes
ENSPTRG00000007165
N
0.985
LOC100409527
Callithrix jacchus
ENSCJAG00000005200
N
0.985
RBPMS2
Homo sapiens
ENSG00000166831
N
0.985
RBPMS2
Echinops telfairi
ENSETEG00000010176
N
0.985
RBPMS2
Spermophilus tridecemlineatus
ENSSTOG00000010055
N
0.985
RBPMS2
Microcebus murinus
ENSMICG00000007355
N
0.969
RBPMS2
Monodelphis domestica
ENSMODG00000010487
N
0.969
RBPMS_CHICK
Gallus gallus
ENSGALG00000002355
N
0.969
RBPMS2
Meleagris gallopavo
ENSMGAG00000001128
N
0.969
RBPMS2
Taeniopygia guttata
ENSTGUG00000004722
N
0.969
RBPMS2
Cavia porcellus
ENSCPOG00000007695
N
0.969
RBPMS2
Takifugu rubripes
ENSTRUG00000016625
N
0.954
RBPMS2
Anolis carolinensis
ENSACAG00000012227
N
0.954
RBPMS2
Ochotona princeps
ENSOPRG00000013668
N
0.939
Q9YGP5
Xenopus laevis
Q9YGP5
N
0.938
AAH81153
Xenopus laevis
AAH81153
N
0.938
ENSXETG00000010668
Xenopus tropicalis
ENSXETG00000010668
N
0.938
AAD16971
Xenopus laevis
AAD16971
N
0.938
AAH97507
Xenopus laevis
AAH97507
N
0.938
RBPMS2
Oryzias latipes
ENSORLG00000001493
N
0.938
RBPMS2
Ornithorhynchus anatinus
ENSOANG00000011802
N
0.938
RBPMS2
Danio rerio
ENSDARG00000045930
N
0.938
rbpms2
Danio rerio
ENSDARG00000079578
N
0.923
RBPMS2
Gasterosteus aculeatus
ENSGACG00000017472
N
0.923
RBPMS
Cavia porcellus
ENSCPOG00000012799
N
0.908
RBPMS
Vicugna pacos
ENSVPAG00000010991
N
0.908
LOC100392847
Callithrix jacchus
ENSCJAG00000012366
N
0.908
RBPMS
Ochotona princeps
ENSOPRG00000013151
N
0.908
RBPMS
Loxodonta africana
ENSLAFG00000000209
N
0.908
RBPMS
Gallus gallus
ENSGALG00000010291
N
0.908
RBPMS
Anolis carolinensis
ENSACAG00000003012
N
0.908
AAH60391
Xenopus laevis
AAH60391
N
0.908
RBPMS
Equus caballus
ENSECAG00000020735
N
0.908
RBPMS
Echinops telfairi
ENSETEG00000017582
N
0.908
Ame_R009021
Ailuropoda melanoleuca
Ame_R009021
N
0.908
RBPMS
Taeniopygia guttata
ENSTGUG00000001776
N
0.908
RBPMS
Homo sapiens
ENSG00000157110
N
0.908
rbpms
Xenopus tropicalis
ENSXETG00000011290
N
0.908
RBPMS
Meleagris gallopavo
ENSMGAG00000005088
N
0.908
Q2KI55_BOVIN
Bos taurus
ENSBTAG00000033727
N
0.908
ENSPPYG00000018487
Pongo pygmaeus
ENSPPYG00000018487
N
0.908
Rbpms
Mus musculus
ENSMUSG00000031586
N
0.908
RBPMS
Procavia capensis
ENSPCAG00000013493
N
0.908
RBPMS
Canis familiaris
ENSCAFG00000006503
N
0.908
RBPMS
Oryctolagus cuniculus
ENSOCUG00000008572
N
0.908
RBPMS
Choloepus hoffmanni
ENSCHOG00000008745
N
0.908
RBPMS
Pan troglodytes
ENSPTRG00000020135
N
0.908
RBPMS
Pteropus vampyrus
ENSPVAG00000001661
N
0.908
RBPMS
Sorex araneus
ENSSARG00000000274
N
0.908
RBPMS
Myotis lucifugus
ENSMLUG00000009391
N
0.908
RBPMS
Macaca mulatta
ENSMMUG00000000458
N
0.908
RGD1561067
Rattus norvegicus
ENSRNOG00000013328
N
0.908
RBPMS
Sus scrofa
ENSSSCG00000015846
N
0.908
RBPMS
Monodelphis domestica
ENSMODG00000019006
N
0.908
RBPMS
Tursiops truncatus
ENSTTRG00000012451
N
0.892
RBPMS
Takifugu rubripes
ENSTRUG00000000041
N
0.877
RBPMS
Oryzias latipes
ENSORLG00000004135
N
0.877
RBPMS
Tarsius syrichta
ENSTSYG00000013982
N
0.877
RBPMS
Gasterosteus aculeatus
ENSGACG00000019471
N
0.877
ENSPPYG00000006553
Pongo pygmaeus
ENSPPYG00000006553
N
0.771
e_gw.368.37.1
Branchiostoma floridae
e_gw.368.37.1
I
0.769