CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Rbpms2
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000004025
T36436_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000003758
RRM
4
69
LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALNGIRFDPENS
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
77 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBPMS2
Tursiops truncatus
ENSTTRG00000011840
N
0.985
RBPMS2
Oryctolagus cuniculus
ENSOCUG00000010388
N
0.985
RBPMS2
Bos taurus
ENSBTAG00000011037
N
0.985
RBPMS2
Myotis lucifugus
ENSMLUG00000013394
N
0.985
RBPMS2
Canis familiaris
ENSCAFG00000017098
N
0.985
RBPMS2
Procavia capensis
ENSPCAG00000015797
N
0.985
A5YBM9_HORSE
Equus caballus
ENSECAG00000015345
N
0.985
RBPMS2
Sus scrofa
ENSSSCG00000004549
N
0.985
Ame_R002022
Ailuropoda melanoleuca
Ame_R002022
N
0.985
Rbpms2
Rattus norvegicus
ENSRNOG00000015896
N
0.985
RBPMS2
Pteropus vampyrus
ENSPVAG00000016622
N
0.985
RBPMS2
Loxodonta africana
ENSLAFG00000018725
N
0.985
Rbpms2
Mus musculus
ENSMUSG00000032387
N
0.985
RBPMS2
Felis catus
ENSFCAG00000011333
N
0.985
RBPMS2
Echinops telfairi
ENSETEG00000010176
N
0.970
RBPMS2
Macaca mulatta
ENSMMUG00000013270
N
0.970
RBPMS2
Spermophilus tridecemlineatus
ENSSTOG00000010055
N
0.970
RBPMS2
Gorilla gorilla
ENSGGOG00000008984
N
0.970
RBPMS2
Homo sapiens
ENSG00000166831
N
0.970
RBPMS2
Pan troglodytes
ENSPTRG00000007165
N
0.970
LOC100409527
Callithrix jacchus
ENSCJAG00000005200
N
0.970
RBPMS2
Cavia porcellus
ENSCPOG00000007695
N
0.955
RBPMS_CHICK
Gallus gallus
ENSGALG00000002355
N
0.955
RBPMS2
Meleagris gallopavo
ENSMGAG00000001128
N
0.955
RBPMS2
Microcebus murinus
ENSMICG00000007355
N
0.955
RBPMS2
Taeniopygia guttata
ENSTGUG00000004722
N
0.955
RBPMS2
Monodelphis domestica
ENSMODG00000010487
N
0.955
RBPMS2
Takifugu rubripes
ENSTRUG00000016625
N
0.939
RBPMS2
Anolis carolinensis
ENSACAG00000012227
N
0.939
RBPMS2
Ochotona princeps
ENSOPRG00000013668
N
0.939
RBPMS2
Danio rerio
ENSDARG00000045930
N
0.924
AAH81153
Xenopus laevis
AAH81153
N
0.924
ENSXETG00000010668
Xenopus tropicalis
ENSXETG00000010668
N
0.924
AAD16971
Xenopus laevis
AAD16971
N
0.924
Q9YGP5
Xenopus laevis
Q9YGP5
N
0.924
RBPMS2
Oryzias latipes
ENSORLG00000001493
N
0.924
RBPMS2
Ornithorhynchus anatinus
ENSOANG00000011802
N
0.924
AAH97507
Xenopus laevis
AAH97507
N
0.924
RBPMS2
Gasterosteus aculeatus
ENSGACG00000017472
N
0.909
rbpms2
Danio rerio
ENSDARG00000079578
N
0.909
RBPMS
Canis familiaris
ENSCAFG00000006503
N
0.894
LOC100392847
Callithrix jacchus
ENSCJAG00000012366
N
0.894
RBPMS
Vicugna pacos
ENSVPAG00000010991
N
0.894
RBPMS
Choloepus hoffmanni
ENSCHOG00000008745
N
0.894
Q2KI55_BOVIN
Bos taurus
ENSBTAG00000033727
N
0.894
rbpms
Xenopus tropicalis
ENSXETG00000011290
N
0.894
RBPMS
Anolis carolinensis
ENSACAG00000003012
N
0.894
AAH60391
Xenopus laevis
AAH60391
N
0.894
RBPMS
Cavia porcellus
ENSCPOG00000012799
N
0.894
Ame_R009021
Ailuropoda melanoleuca
Ame_R009021
N
0.894
RBPMS
Pteropus vampyrus
ENSPVAG00000001661
N
0.894
Rbpms
Mus musculus
ENSMUSG00000031586
N
0.894
RBPMS
Oryctolagus cuniculus
ENSOCUG00000008572
N
0.894
RBPMS
Ochotona princeps
ENSOPRG00000013151
N
0.894
RBPMS
Procavia capensis
ENSPCAG00000013493
N
0.894
RBPMS
Monodelphis domestica
ENSMODG00000019006
N
0.894
RBPMS
Macaca mulatta
ENSMMUG00000000458
N
0.894
RBPMS
Loxodonta africana
ENSLAFG00000000209
N
0.894
RBPMS
Meleagris gallopavo
ENSMGAG00000005088
N
0.894
RBPMS
Myotis lucifugus
ENSMLUG00000009391
N
0.894
RBPMS
Gallus gallus
ENSGALG00000010291
N
0.894
RBPMS
Homo sapiens
ENSG00000157110
N
0.894
RBPMS
Sus scrofa
ENSSSCG00000015846
N
0.894
RBPMS
Taeniopygia guttata
ENSTGUG00000001776
N
0.894
RBPMS
Equus caballus
ENSECAG00000020735
N
0.894
RBPMS
Echinops telfairi
ENSETEG00000017582
N
0.894
RBPMS
Sorex araneus
ENSSARG00000000274
N
0.894
ENSPPYG00000018487
Pongo pygmaeus
ENSPPYG00000018487
N
0.894
RBPMS
Pan troglodytes
ENSPTRG00000020135
N
0.894
RGD1561067
Rattus norvegicus
ENSRNOG00000013328
N
0.894
RBPMS
Tursiops truncatus
ENSTTRG00000012451
N
0.879
RBPMS
Gasterosteus aculeatus
ENSGACG00000019471
N
0.864
RBPMS
Oryzias latipes
ENSORLG00000004135
N
0.864
RBPMS
Tarsius syrichta
ENSTSYG00000013982
N
0.864
RBPMS
Takifugu rubripes
ENSTRUG00000000041
N
0.864
ENSPPYG00000006553
Pongo pygmaeus
ENSPPYG00000006553
N
0.771
e_gw.368.37.1
Branchiostoma floridae
e_gw.368.37.1
I
0.758