Fxr1 (Mus musculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMUSG00000027680 T19130_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.992
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.791
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000001620 KH 220 279
ENSMUSP00000001620 KH 284 351
ENSMUSP00000088789 KH 220 279
ENSMUSP00000088789 KH 284 351
ENSMUSP00000103832 KH 220 279
ENSMUSP00000103832 KH 284 351
ENSMUSP00000103833 KH 220 279
ENSMUSP00000103833 KH 284 351

Links

Other KH family RBPs
Other Mus musculus RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_2853000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2853000001 N 0.000
fgenesh1_pg.C_scaffold_305000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_305000001 N 0.000
s_439369 Phytophthora sojae s_439369 N 0.000
s_440041 Phytophthora sojae s_440041 N 0.000
s_445517 Phytophthora sojae s_445517 N 0.000
s_445549 Phytophthora sojae s_445549 N 0.000
s_445656 Phytophthora sojae s_445656 N 0.000
s_446612 Phytophthora sojae s_446612 N 0.000
s_452594 Phytophthora sojae s_452594 N 0.000
s_452714 Phytophthora sojae s_452714 N 0.000
s_455072 Phytophthora sojae s_455072 N 0.000
s_455576 Phytophthora sojae s_455576 N 0.000
s_455924 Phytophthora sojae s_455924 N 0.000
s_456636 Phytophthora sojae s_456636 N 0.000
s_457020 Phytophthora sojae s_457020 N 0.000
s_459016 Phytophthora sojae s_459016 N 0.000
s_459202 Phytophthora sojae s_459202 N 0.000
s_461682 Phytophthora sojae s_461682 N 0.000
s_462797 Phytophthora sojae s_462797 N 0.000
s_463332 Phytophthora sojae s_463332 N 0.000
s_464205 Phytophthora sojae s_464205 N 0.000
s_466998 Phytophthora sojae s_466998 N 0.000
s_469013 Phytophthora sojae s_469013 N 0.000
s_469380 Phytophthora sojae s_469380 N 0.000
s_469409 Phytophthora sojae s_469409 N 0.000
s_471643 Phytophthora sojae s_471643 N 0.000
s_473180 Phytophthora sojae s_473180 N 0.000
s_477701 Phytophthora sojae s_477701 N 0.000
s_517718 Phytophthora sojae s_517718 N 0.000