Fxr1 (Mus musculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMUSG00000027680 T19130_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.992
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.791
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000001620 KH 220 279
ENSMUSP00000001620 KH 284 351
ENSMUSP00000088789 KH 220 279
ENSMUSP00000088789 KH 284 351
ENSMUSP00000103832 KH 220 279
ENSMUSP00000103832 KH 284 351
ENSMUSP00000103833 KH 220 279
ENSMUSP00000103833 KH 284 351

Links

Other KH family RBPs
Other Mus musculus RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.992
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.992
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.992
FXR1 Echinops telfairi ENSETEG00000006891 I 0.992
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.992
FXR1 Canis familiaris ENSCAFG00000011582 I 0.992
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.992
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.992
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.992
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.992
FXR1 Equus caballus ENSECAG00000007560 I 0.992
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.992
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.992
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.992
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.992
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.992
FXR1 Homo sapiens ENSG00000114416 D 0.992
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.984
FXR1 Sus scrofa ENSSSCG00000011769 I 0.984
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.984
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.984
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.977
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.969
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.969
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.961
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.961
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.961
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.953
AAY79166 Xenopus laevis AAY79166 I 0.945
AAY79165 Xenopus laevis AAY79165 I 0.945
AAH73457 Xenopus laevis AAH73457 I 0.945
AAI31885 Xenopus laevis AAI31885 I 0.945
P51115 Xenopus laevis P51115 I 0.945
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.945
AAC59682 Xenopus laevis AAC59682 I 0.938
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.938
AAH43638 Xenopus laevis AAH43638 I 0.938
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.883
FXR1 Oryzias latipes ENSORLG00000011787 I 0.860
fxr1 Danio rerio ENSDARG00000022968 I 0.860
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.837
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.837
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.829
Fxr1 Dipodomys ordii ENSDORG00000005853 I 0.828
FXR1 Dasypus novemcinctus ENSDNOG00000019065 I 0.828
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.806
FMR1 Canis familiaris ENSCAFG00000019085 I 0.800
FXR2 Oryzias latipes ENSORLG00000011571 I 0.800
FXR2 Canis familiaris ENSCAFG00000016685 I 0.798
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.798
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.791
Fxr2 Mus musculus ENSMUSG00000018765 I 0.791
FXR2 Felis catus ENSFCAG00000009620 I 0.791
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.791
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.791
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.791
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.791
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.791
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.791
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.791
FXR2 Microcebus murinus ENSMICG00000014799 I 0.791
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.791
LOC100147323 Equus caballus ENSECAG00000007051 I 0.791
FXR2 Homo sapiens ENSG00000129245 D 0.791
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.791
FXR2 Sus scrofa ENSSSCG00000017953 I 0.791
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.791
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.791
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.791
FXR2 Bos taurus ENSBTAG00000005462 I 0.791
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.791
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.791
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.786
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.785
FXR2 Procavia capensis ENSPCAG00000013184 I 0.783
FXR2 Echinops telfairi ENSETEG00000018613 I 0.783
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.783
Q2KHP9 Xenopus laevis Q2KHP9 I 0.777
AAI12953 Xenopus laevis AAI12953 I 0.777
AAI70204 Xenopus laevis AAI70204 I 0.777
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.775
AAC59683 Xenopus laevis AAC59683 I 0.769
P51113 Xenopus laevis P51113 I 0.769
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.762
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.760
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.754
FMR1 Oryzias latipes ENSORLG00000009094 I 0.748
fmr1 Danio rerio ENSDARG00000037433 I 0.731
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.729
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.712
PHUM440700 Pediculus humanus PHUM440700 I 0.712
FXR2 Gasterosteus aculeatus ENSGACG00000019983 I 0.710
AAEL009326 Aedes aegypti AAEL009326 I 0.705
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.705