TERG_04970 (Trichophyton rubrum)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		TERG_04970 T25327_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TERG_04970T0 RRM 287 348
TERG_04970T0 PUF 493 527
TERG_04970T0 PUF 530 564
TERG_04970T0 PUF 566 599
TERG_04970T0 PUF 601 636
TERG_04970T0 PUF 640 673

Links

Other PUF,RRM family RBPs
Other Trichophyton rubrum RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_089090 Aspergillus clavatus CADACLAG00008911 N 0.895
AFLA_129760 Aspergillus flavus CADAFLAG00010034 N 0.899
AFUA_2G05610 Aspergillus fumigatus CADAFUAG00003379 N 0.882
An02g13940 Aspergillus niger CADANGAG00002920 N 0.911
ANIA_07474 Aspergillus nidulans CADANIAG00000567 N 0.886
AO090001000672 Aspergillus oryzae CADAORAG00000614 N 0.899
ARB_03872 Arthroderma benhamiae ARB_03872 N 1.000
ATEG_06748 Aspergillus terreus CADATEAG00008207 N 0.865
BC1G_15545 Botrytis cinerea BC1G_15545 N 0.759
BDBG_08030 Blastomyces dermatitidis BDBG_08030 N 0.928
CHGG_03262 Chaetomium globosum CHGG_03262 N 0.810
CIMG_00764 Coccidioides immitis CIMG_00764 N 0.932
CPSG_07974 Coccidioides posadasii CPSG_07974 N 0.932
EAT78761.1 Phaeosphaeria nodorum EAT78761.1 N 0.765
estExt_fgenesh1_pm.C_60200 Neurospora tetrasperma estExt_fgenesh1_pm.C_60200 N 0.810
estExt_fgenesh3_pm.C_50632 Neurospora discreta estExt_fgenesh3_pm.C_50632 N 0.806
estExt_Genewise1Plus.C_10494 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_10494 N 0.772
estExt_Genewise1Plus.C_30707 Thielavia terrestris estExt_Genewise1Plus.C_30707 N 0.726
estExt_Genewise1Plus.C_40921 Myceliophthora thermophila estExt_Genewise1Plus.C_40921 N 0.797
e_gw1.1.1743.1 Cryphonectria parasitica e_gw1.1.1743.1 N 0.781
e_gw1.10.966.1 Trichoderma atroviride e_gw1.10.966.1 N 0.776
e_gw1.3.863.1 Nectria haematococca e_gw1.3.863.1 N 0.793
fgenesh1_pm.00082_#_71 Aspergillus carbonarius fgenesh1_pm.00082_#_71 N 0.895
fgenesh1_pm.C_chr_3000287 Mycosphaerella graminicola fgenesh1_pm.C_chr_3000287 N 0.735
FGSG_13028 Fusarium graminearum FGSG_13028 N 0.781
FOXG_01859 Fusarium oxysporum FOXG_01859 N 0.781
FVEG_08236 Fusarium verticillioides FVEG_08236 N 0.785
GLRG_00145 Colletotrichum graminicola GLRG_00145 N 0.793
GSTUMT00008056001 Tuber melanosporum GSTUMT00008056001 N 0.810
gw1.1.1237.1 Trichoderma reesei gw1.1.1237.1 N 0.797
gw1.2.1414.1 Trichoderma virens gw1.2.1414.1 N 0.768
HCAG_00994 Histoplasma capsulatum HCAG_00994 N 0.924
MCYG_03539 Microsporum canis MCYG_03539 N 0.992
MGG_06318 Magnaporthe oryzae MGG_06318 N 0.803
MGYG_03148 Microsporum gypseum MGYG_03148 N 1.000
NCU06199 Neurospora crassa NCU06199 N 0.810
NFIA_082330 Neosartorya fischeri CADNFIAG00006734 N 0.890
PABG_04750 Paracoccidioides brasiliensis PABG_04750 N 0.916
Pa_7_8390 Podospora anserina Pa_7_8390 N 0.722
Pc22g08770 Penicillium chrysogenum Pc22g08770 N 0.890
PMAA_071510 Penicillium marneffei PMAA_071510 N 0.916
PTRG_10794 Pyrenophora tritici repentis PTRG_10794 N 0.764
SNOG_13737 Stagonospora nodorum SNOG_13737 N 0.765
SS1G_13666 Sclerotinia sclerotiorum SS1G_13666 N 0.768
TEQG_01260 Trichophyton equinum TEQG_01260 N 1.000
TESG_05413 Trichophyton tonsurans TESG_05413 N 0.996
TRV_06639 Trichophyton verrucosum TRV_06639 N 0.996
UREG_00739 Uncinocarpus reesii UREG_00739 N 0.911
VDAG_05840 Verticillium dahliae VDAG_05840 N 0.776
VDBG_06774 Verticillium albo atrum VDBG_06774 N 0.776