PK15272.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK15272.1 T31702_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.219.6.1_CONSTRUCT
M199_0.6 		RNAcompete CONSTRUCTS UGUUUUD RNAcompete
Ray et al.(2013)
RNCMPT00229 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PK15272.1 RRM 182 251
PK15272.1 RRM 275 346
PK15272.1 RRM 395 459

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45128 Xenopus laevis AAH45128 I 0.000
BAE54372 Xenopus laevis BAE54372 I 0.000
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.000
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.000
nono Danio rerio ENSDARG00000020482 I 0.000
NONO Gasterosteus aculeatus ENSGACG00000011824 I 0.000
NONO Takifugu rubripes ENSTRUG00000005554 I 0.000
nono Xenopus tropicalis ENSXETG00000020868 I 0.000