RBM28 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000002389 T36745_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.745
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000002189 RRM 6 74
ENSEEUP00000002189 RRM 116 185
ENSEEUP00000002189 RRM 374 404
ENSEEUP00000002189 RRM 492 569

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.748
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.745
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.742
LOC100071725 Equus caballus ENSECAG00000007745 I 0.755
RBM28 Tupaia belangeri ENSTBEG00000012749 N 0.735
RBM28 Sorex araneus ENSSARG00000008303 I 0.702
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.721
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.746
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.745
RBM28 Procavia capensis ENSPCAG00000008223 N 0.748
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.764
Rbm28 Mus musculus ENSMUSG00000029701 I 0.734
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.707
RBM28 Canis familiaris ENSCAFG00000001667 I 0.752
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.746
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.749
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.704
RBM28 Echinops telfairi ENSETEG00000007130 I 0.732
RBM28 Homo sapiens ENSG00000106344 D 0.745
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.757
RBM28 Microcebus murinus ENSMICG00000000107 I 0.720
RBM28 Bos taurus ENSBTAG00000017001 I 0.758