RBM28 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000006253 T35785_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.928
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000005639 RRM 6 74
ENSCPOP00000005639 RRM 117 186
ENSCPOP00000005639 RRM 341 410
ENSCPOP00000005639 RRM 493 570

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100071725 Equus caballus ENSECAG00000007745 I 0.931
RBM28 Homo sapiens ENSG00000106344 D 0.928
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.928
RBM28 Canis familiaris ENSCAFG00000001667 I 0.928
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.924
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.924
RBM28 Bos taurus ENSBTAG00000017001 I 0.917
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.917
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.914
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.914
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.902
Rbm28 Mus musculus ENSMUSG00000029701 I 0.897
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.897
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.872
RBM28 Sorex araneus ENSSARG00000008303 I 0.869
RBM28 Echinops telfairi ENSETEG00000007130 I 0.866
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.866
RBM28 Microcebus murinus ENSMICG00000000107 I 0.862
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.837
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.810
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.803
RBM28 Tarsius syrichta ENSTSYG00000002892 I 0.800
RBM28 Spermophilus tridecemlineatus ENSSTOG00000002169 I 0.784
RBM28 Macropus eugenii ENSMEUG00000009611 I 0.752
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.749
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.708