RBM28 (Echinops telfairi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSETEG00000007130 T36915_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.874
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000005792 RRM 6 74
ENSETEP00000005792 RRM 115 184
ENSETEP00000005792 RRM 330 397
ENSETEP00000005792 RRM 479 560

Links

Other RRM family RBPs
Other Echinops telfairi RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.908
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.887
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.884
LOC100071725 Equus caballus ENSECAG00000007745 I 0.880
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.880
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.877
RBM28 Bos taurus ENSBTAG00000017001 I 0.877
RBM28 Homo sapiens ENSG00000106344 D 0.874
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.874
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.873
RBM28 Canis familiaris ENSCAFG00000001667 I 0.873
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.866
Rbm28 Mus musculus ENSMUSG00000029701 I 0.856
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.853
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.846
RBM28 Microcebus murinus ENSMICG00000000107 I 0.836
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.829
RBM28 Sorex araneus ENSSARG00000008303 I 0.816
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.811
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.790
RBM28 Spermophilus tridecemlineatus ENSSTOG00000002169 I 0.771
RBM28 Tarsius syrichta ENSTSYG00000002892 I 0.759
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.747
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.732
RBM28 Macropus eugenii ENSMEUG00000009611 I 0.726
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.713