RBM28 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000003009 T39615_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.903
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000002616 RRM 6 74
ENSOCUP00000002616 RRM 116 185
ENSOCUP00000002616 RRM 316 382
ENSOCUP00000002616 RRM 468 545

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.931
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.911
RBM28 Bos taurus ENSBTAG00000017001 I 0.907
LOC100071725 Equus caballus ENSECAG00000007745 I 0.903
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.903
RBM28 Homo sapiens ENSG00000106344 D 0.903
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.902
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.900
RBM28 Tursiops truncatus ENSTTRG00000013647 I 0.900
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.897
RBM28 Canis familiaris ENSCAFG00000001667 I 0.893
RBM28 Microcebus murinus ENSMICG00000000107 I 0.885
Rbm28 Mus musculus ENSMUSG00000029701 I 0.882
RBM28 Echinops telfairi ENSETEG00000007130 I 0.873
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.872
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.869
RBM28 Sorex araneus ENSSARG00000008303 I 0.862
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.858
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.839
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.797
RBM28 Tarsius syrichta ENSTSYG00000002892 I 0.786
RBM28 Spermophilus tridecemlineatus ENSSTOG00000002169 I 0.781
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.775
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.764
RBM28 Macropus eugenii ENSMEUG00000009611 I 0.745
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.715