RBM28 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000013647 T42653_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM28
M047_0.6 		Homo sapiens GWGUAGD RNAcompete
Ray et al.(2013)
RNCMPT00049 		0.935
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000012957 RRM 6 73
ENSTTRP00000012957 RRM 115 184
ENSTTRP00000012957 RRM 334 405
ENSTTRP00000012957 RRM 486 565

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100071725 Equus caballus ENSECAG00000007745 I 0.952
Ame_R001195 Ailuropoda melanoleuca Ame_R001195 I 0.952
RBM28 Bos taurus ENSBTAG00000017001 I 0.945
RBM28 Callithrix jacchus ENSCJAG00000017731 I 0.942
RBM28 Canis familiaris ENSCAFG00000001667 I 0.942
ENSPPYG00000017975 Pongo pygmaeus ENSPPYG00000017975 I 0.938
RBM28 Pan troglodytes ENSPTRG00000019659 I 0.935
RBM28 Homo sapiens ENSG00000106344 D 0.935
RBM28 Loxodonta africana ENSLAFG00000010717 I 0.924
RBM28 Cavia porcellus ENSCPOG00000006253 I 0.914
RBM28 Oryctolagus cuniculus ENSOCUG00000003009 I 0.900
Rbm28 Rattus norvegicus ENSRNOG00000005468 I 0.897
Rbm28 Mus musculus ENSMUSG00000029701 I 0.891
RBM28 Echinops telfairi ENSETEG00000007130 I 0.887
RBM28 Monodelphis domestica ENSMODG00000015151 I 0.883
RBM28 Otolemur garnettii ENSOGAG00000006011 I 0.880
RBM28 Microcebus murinus ENSMICG00000000107 I 0.869
RBM28 Sorex araneus ENSSARG00000008303 I 0.866
RBM28 Dasypus novemcinctus ENSDNOG00000001124 I 0.838
RBM28 Myotis lucifugus ENSMLUG00000002186 I 0.821
RBM28 Tarsius syrichta ENSTSYG00000002892 I 0.804
RBM28 Gorilla gorilla ENSGGOG00000004644 I 0.801
RBM28 Spermophilus tridecemlineatus ENSSTOG00000002169 I 0.799
RBM28 Macropus eugenii ENSMEUG00000009611 I 0.763
RBM28 Erinaceus europaeus ENSEEUG00000002389 I 0.746
ENSOANG00000000815 Ornithorhynchus anatinus ENSOANG00000000815 I 0.735