SPEN (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000018414 T40254_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000023046 RRM 8 74
ENSORLP00000023046 RRM 334 404
ENSORLP00000023046 RRM 437 504
ENSORLP00000023046 RRM 516 580

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_00312 Arthroderma benhamiae ARB_00312 N 0.000
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.000
CHGG_01938 Chaetomium globosum CHGG_01938 N 0.000
EAT91924.1 Phaeosphaeria nodorum EAT91924.1 N 0.000
estExt_fgenesh1_kg.C_130003 Mycosphaerella fijiensis estExt_fgenesh1_kg.C_130003 N 0.000
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.000
estExt_fgenesh1_pg.C_20037 Myceliophthora thermophila estExt_fgenesh1_pg.C_20037 N 0.000
estExt_fgenesh2_kg.C_40317 Thielavia terrestris estExt_fgenesh2_kg.C_40317 N 0.000
estExt_Genewise1.C_70784 Neurospora discreta estExt_Genewise1.C_70784 N 0.000
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.000
estExt_Genewise1Plus.C_50393 Neurospora tetrasperma estExt_Genewise1Plus.C_50393 N 0.000
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.000
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.000
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.000
FGSG_04914 Fusarium graminearum FGSG_04914 N 0.000
FOXG_05707 Fusarium oxysporum FOXG_05707 N 0.000
GLRG_00505 Colletotrichum graminicola GLRG_00505 N 0.000
GSTUMT00004748001 Tuber melanosporum GSTUMT00004748001 N 0.000
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.000
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.000
MCYG_05630 Microsporum canis MCYG_05630 N 0.000
MGG_03740 Magnaporthe oryzae MGG_03740 N 0.000
MGYG_02725 Microsporum gypseum MGYG_02725 N 0.000
NCU03226 Neurospora crassa NCU03226 N 0.000
Pa_1_1890 Podospora anserina Pa_1_1890 N 0.000
PMAA_055960 Penicillium marneffei PMAA_055960 N 0.000
SNOG_00429 Stagonospora nodorum SNOG_00429 N 0.000
SS1G_12129 Sclerotinia sclerotiorum SS1G_12129 N 0.000
TEQG_00651 Trichophyton equinum TEQG_00651 N 0.000
TERG_06808 Trichophyton rubrum TERG_06808 N 0.000
TESG_05569 Trichophyton tonsurans TESG_05569 N 0.000