estExt_fgenesh1_kg.C_130003 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_kg.C_130003 T50400_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_130003 RRM 44 114

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EAT91924.1 Phaeosphaeria nodorum EAT91924.1 N 0.845
SNOG_00429 Stagonospora nodorum SNOG_00429 N 0.845
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.845
AB00849.1 Alternaria brassicicola AB00849.1 N 0.817
estExt_fgenesh1_kg.C_20142 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_20142 N 0.803
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.803
PTRG_10763 Pyrenophora tritici repentis PTRG_10763 N 0.789
SS1G_12129 Sclerotinia sclerotiorum SS1G_12129 N 0.746
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.746
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.732
FGSG_04914 Fusarium graminearum FGSG_04914 N 0.732
estExt_Genewise1.C_70784 Neurospora discreta estExt_Genewise1.C_70784 N 0.732
estExt_Genewise1Plus.C_50393 Neurospora tetrasperma estExt_Genewise1Plus.C_50393 N 0.732
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.732
NCU03226 Neurospora crassa NCU03226 N 0.732
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.732
FVEG_03573 Fusarium verticillioides FVEG_03573 N 0.718
CC1G_08323 Coprinopsis cinerea CC1G_08323 N 0.718
FOXG_05707 Fusarium oxysporum FOXG_05707 N 0.718
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.718
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.718
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.718
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.718
Pa_1_1890 Podospora anserina Pa_1_1890 N 0.718
NFIA_035610 Neosartorya fischeri CADNFIAG00003400 N 0.704
estExt_fgenesh2_kg.C_40317 Thielavia terrestris estExt_fgenesh2_kg.C_40317 N 0.704
AFUA_2G03260 Aspergillus fumigatus CADAFUAG00003323 N 0.704
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.704
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.704
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.704
GLRG_00505 Colletotrichum graminicola GLRG_00505 N 0.704
MGG_03740 Magnaporthe oryzae MGG_03740 N 0.704