estExt_fgenesh2_kg.C_40317 (Thielavia terrestris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh2_kg.C_40317 T50756_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_40317 RRM 53 123

Links

Other RRM family RBPs
Other Thielavia terrestris RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_01938 Chaetomium globosum CHGG_01938 N 0.944
estExt_fgenesh1_pg.C_20037 Myceliophthora thermophila estExt_fgenesh1_pg.C_20037 N 0.930
estExt_Genewise1Plus.C_50393 Neurospora tetrasperma estExt_Genewise1Plus.C_50393 N 0.859
NCU03226 Neurospora crassa NCU03226 N 0.859
estExt_Genewise1.C_70784 Neurospora discreta estExt_Genewise1.C_70784 N 0.859
Pa_1_1890 Podospora anserina Pa_1_1890 N 0.845
MGG_03740 Magnaporthe oryzae MGG_03740 N 0.817
GLRG_00505 Colletotrichum graminicola GLRG_00505 N 0.817
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.803
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.789
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.789
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.789
FVEG_03573 Fusarium verticillioides FVEG_03573 N 0.775
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.775
FOXG_05707 Fusarium oxysporum FOXG_05707 N 0.775
SS1G_12129 Sclerotinia sclerotiorum SS1G_12129 N 0.761
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.746
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.746
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.732
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.732
FGSG_04914 Fusarium graminearum FGSG_04914 N 0.732
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.732
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.718
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.718
PTRG_10763 Pyrenophora tritici repentis PTRG_10763 N 0.718
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.704
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.704
AB00849.1 Alternaria brassicicola AB00849.1 N 0.704
estExt_Genewise1.C_40022 Postia placenta estExt_Genewise1.C_40022 N 0.704
estExt_fgenesh1_kg.C_130003 Mycosphaerella fijiensis estExt_fgenesh1_kg.C_130003 N 0.704