RBM46 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000005307 T41901_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.935
ENSGALG00000014267
M234_0.6 		Gallus gallus GAUGAW RNAcompete
Ray et al.(2013)
RNCMPT00279 		0.701
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000005458 RRM 63 130
ENSTGUP00000005458 RRM 143 208
ENSTGUP00000005458 RRM 238 302

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A5D9E0_BOVIN Bos taurus ENSBTAG00000002356 I 0.723
Ame_R017652 Ailuropoda melanoleuca Ame_R017652 I 0.723
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.935
ENSCING00000004101 Ciona intestinalis ENSCING00000004101 I 0.705
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.920
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.891
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.906
ENSCSAVG00000000326 Ciona savignyi ENSCSAVG00000000326 I 0.715
ENSGALG00000014267 Gallus gallus ENSGALG00000014267 D 0.718
ENSMODG00000007003 Monodelphis domestica ENSMODG00000007003 I 0.718
ENSPPYG00000014688 Pongo pygmaeus ENSPPYG00000014688 I 0.714
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.935
ENSXETG00000012802 Xenopus tropicalis ENSXETG00000012802 D 0.713
e_gw.262.16.1 Branchiostoma floridae e_gw.262.16.1 I 0.723
e_gw.262.30.1 Branchiostoma floridae e_gw.262.30.1 I 0.731
e_gw.60.249.1 Branchiostoma floridae e_gw.60.249.1 I 0.736
LOC100063743 Equus caballus ENSECAG00000004400 I 0.713
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.930
LOC100410421 Callithrix jacchus ENSCJAG00000019385 I 0.723
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.935
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.935
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.831
Rbm46 Mus musculus ENSMUSG00000033882 I 0.935
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.886
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.935
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.930
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.935
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.915
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.930
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.725
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.701
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.925
RBM46 Sus scrofa ENSSSCG00000008994 I 0.935
RBM46 Sorex araneus ENSSARG00000006520 I 0.935
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.935
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.935
RBM46 Meleagris gallopavo ENSMGAG00000001457 I 0.793
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.930
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.891
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.900
RBM46 Echinops telfairi ENSETEG00000014902 I 0.935
RBM46 Felis catus ENSFCAG00000009246 I 0.925
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.925
rbm46 Danio rerio ENSDARG00000079452 I 0.776
RBM46 Homo sapiens ENSG00000151962 D 0.935
RBM46 Equus caballus ENSECAG00000007649 I 0.921
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.930
RBM46 Bos taurus ENSBTAG00000001696 I 0.935
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.930
RBM46 Canis familiaris ENSCAFG00000008473 I 0.935
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.935
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.935
RBM46 Gallus gallus ENSGALG00000009278 I 0.872
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.794
RBM47 Choloepus hoffmanni ENSCHOG00000011731 I 0.723
RBM47 Sus scrofa ENSSSCG00000008796 I 0.723
RBM47 Anolis carolinensis ENSACAG00000011833 I 0.728
RBM47 Tursiops truncatus ENSTTRG00000002839 I 0.723
RBM47 Cavia porcellus ENSCPOG00000014100 I 0.723
RBM47 Taeniopygia guttata ENSTGUG00000008705 I 0.718
RBM47 Dasypus novemcinctus ENSDNOG00000006858 I 0.723
RBM47 Sorex araneus ENSSARG00000001735 I 0.723
RBM47 Meleagris gallopavo ENSMGAG00000012226 I 0.718
RBM47 Macropus eugenii ENSMEUG00000009516 I 0.718
RBM47 Loxodonta africana ENSLAFG00000011998 I 0.723
RBM47 Gorilla gorilla ENSGGOG00000001367 I 0.723
Rbm47 Mus musculus ENSMUSG00000070780 I 0.708
RBM47 Homo sapiens ENSG00000163694 I 0.723
RBM47 Ornithorhynchus anatinus ENSOANG00000008978 I 0.708
RBM47 Oryctolagus cuniculus ENSOCUG00000012034 I 0.723
RBM47 Macaca mulatta ENSMMUG00000012036 I 0.723
Rbm47 Rattus norvegicus ENSRNOG00000002408 I 0.708
RBM47 Echinops telfairi ENSETEG00000009194 I 0.723
RBM47 Pteropus vampyrus ENSPVAG00000003812 I 0.723
RBM47 Pan troglodytes ENSPTRG00000016006 I 0.723
RBM47 Felis catus ENSFCAG00000012399 I 0.723
RBM47 Procavia capensis ENSPCAG00000011879 I 0.723
RBM47_CANFA Canis familiaris ENSCAFG00000015898 I 0.713
XP_001196183.1 Strongylocentrotus purpuratus XP_001196183.1 I 0.723
XP_781163.1 Strongylocentrotus purpuratus XP_781163.1 I 0.723