CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TNRC6A
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000006142
T41909_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000006343
RRM
1704
1768
LVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
116 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
s_439369
Phytophthora sojae
s_439369
N
0.000
s_440041
Phytophthora sojae
s_440041
N
0.000
s_445517
Phytophthora sojae
s_445517
N
0.000
s_445549
Phytophthora sojae
s_445549
N
0.000
s_445656
Phytophthora sojae
s_445656
N
0.000
s_446612
Phytophthora sojae
s_446612
N
0.000
s_452594
Phytophthora sojae
s_452594
N
0.000
s_452714
Phytophthora sojae
s_452714
N
0.000
s_452989
Phytophthora sojae
s_452989
N
0.000
s_455072
Phytophthora sojae
s_455072
N
0.000
s_455924
Phytophthora sojae
s_455924
N
0.000
s_456636
Phytophthora sojae
s_456636
N
0.000
s_459016
Phytophthora sojae
s_459016
N
0.000
s_459202
Phytophthora sojae
s_459202
N
0.000
s_461682
Phytophthora sojae
s_461682
N
0.000
s_462797
Phytophthora sojae
s_462797
N
0.000
s_463332
Phytophthora sojae
s_463332
N
0.000
s_464205
Phytophthora sojae
s_464205
N
0.000
s_469380
Phytophthora sojae
s_469380
N
0.000
s_471430
Phytophthora sojae
s_471430
N
0.000
s_471643
Phytophthora sojae
s_471643
N
0.000
s_473180
Phytophthora sojae
s_473180
N
0.000
s_477701
Phytophthora sojae
s_477701
N
0.000
s_517718
Phytophthora sojae
s_517718
N
0.000