CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP007802
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP007802
T32528_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP007802-PA
RRM
1101
1164
LLLKNLTAQIDGSTLRTLCMQHGPLQNFHLYLNHGIALCKYLTREEANKAQLALNNCVLGNTTI
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
54 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ010645
Culex pipiens
CpipJ_CPIJ010645
N
0.938
CPIJ010645
Culex quinquefasciatus
CPIJ010645
N
0.938
AAEL007436
Aedes aegypti
AAEL007436
N
0.906
GJ14351
Drosophila virilis
FBgn0201564
N
0.877
GL18179
Drosophila persimilis
FBgn0155782
N
0.877
GF19039
Drosophila ananassae
FBgn0096051
N
0.877
GA16600-RA
Drosophila pseudoobscura
FBgn0076615
N
0.877
GH23931
Drosophila grimshawi
FBgn0131388
N
0.862
GM26772
Drosophila sechellia
FBgn0181625
N
0.862
GD24374
Drosophila simulans
FBgn0195715
N
0.862
gw
Drosophila melanogaster
FBgn0051992
N
0.862
GK13697
Drosophila willistoni
FBgn0215705
N
0.862
GE14506
Drosophila yakuba
FBgn0232110
N
0.846
GG16439
Drosophila erecta
FBgn0108670
N
0.846
AAEL801228
Aedes aegypti
AAEL007447
N
0.844
DGIL_AUG5s11561g1t1
Acyrtosiphon pisum
DGIL_AUG5s11561g1t1
N
0.831
BGIBMGA005589
Bombyx mori
BGIBMGA005589
N
0.815
amel4_ncbi_hmm5263
Apis mellifera
amel4_ncbi_hmm5263
N
0.815
AGAP007808
Anopheles gambiae
AGAP007808
N
0.815
PASA_GEN_0100279
Daphnia pulex
PASA_GEN_0100279
N
0.785
CpipJ_CPIJ011735
Culex pipiens
CpipJ_CPIJ011735
N
0.769
AAEL007449
Aedes aegypti
AAEL007449
N
0.769
CPIJ011735
Culex quinquefasciatus
CPIJ011735
N
0.769
AGAP007803
Anopheles gambiae
AGAP007803
N
0.723
TNRC6B
Gasterosteus aculeatus
ENSGACG00000007421
N
0.723
Ame_R017991
Ailuropoda melanoleuca
Ame_R017991
N
0.708
estExt_fgenesh2_pg.C_5340004
Branchiostoma floridae
estExt_fgenesh2_pg.C_5340004
N
0.708
TNRC6A
Tursiops truncatus
ENSTTRG00000002008
N
0.708
estExt_fgenesh2_pg.C_4930048
Branchiostoma floridae
estExt_fgenesh2_pg.C_4930048
N
0.708
Tnrc6a
Rattus norvegicus
ENSRNOG00000024737
N
0.708
TNRC6A
Equus caballus
ENSECAG00000025056
N
0.708
Tnrc6a
Dipodomys ordii
ENSDORG00000014734
N
0.708
TNRC6A
Homo sapiens
ENSG00000090905
N
0.708
TNRC6A
Gallus gallus
ENSGALG00000006068
N
0.708
TNRC6A
Gorilla gorilla
ENSGGOG00000005137
N
0.708
TNRC6A
Danio rerio
ENSDARG00000079688
N
0.708
TNRC6A
Callithrix jacchus
ENSCJAG00000020677
N
0.708
TNRC6A
Anolis carolinensis
ENSACAG00000011857
N
0.708
TNRC6A
Bos taurus
ENSBTAG00000017999
N
0.708
TNRC6A
Canis familiaris
ENSCAFG00000017531
N
0.708
TNRC6A
Choloepus hoffmanni
ENSCHOG00000009374
N
0.708
TNRC6A
Loxodonta africana
ENSLAFG00000004209
N
0.708
TNRC6A
Macropus eugenii
ENSMEUG00000015959
N
0.708
TNRC6A
Oryctolagus cuniculus
ENSOCUG00000004325
N
0.708
ENSPPYG00000007202
Pongo pygmaeus
ENSPPYG00000007202
N
0.708
TNRC6A
Tupaia belangeri
ENSTBEG00000014965
N
0.708
TNRC6A
Taeniopygia guttata
ENSTGUG00000006142
N
0.708
TNRC6A
Ornithorhynchus anatinus
ENSOANG00000007672
N
0.708
Tnrc6a
Mus musculus
ENSMUSG00000052707
N
0.708
TNRC6A
Meleagris gallopavo
ENSMGAG00000006455
N
0.708
TNRC6A
Microcebus murinus
ENSMICG00000001883
N
0.708
TNRC6A
Macaca mulatta
ENSMMUG00000020428
N
0.708
TNRC6A
Monodelphis domestica
ENSMODG00000016348
N
0.708
TNRC6A
Tarsius syrichta
ENSTSYG00000012711
N
0.708